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mirror of https://github.com/msberends/AMR.git synced 2025-07-08 15:21:58 +02:00
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2018-04-03 16:07:32 +02:00
parent 4a47e59e6f
commit 3165c50d06
13 changed files with 226 additions and 158 deletions

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@ -30,7 +30,7 @@ abname("AMCL+GENT")
# "amoxicillin and enzyme inhibitor + gentamicin"
abname(c("AMCL", "GENT"))
# "amoxicillin and enzyme inhibitor" "gentamicin"
# "amoxicillin and enzyme inhibitor" "gentamicin"
abname("AMCL", to = "trivial_nl")
# "Amoxicilline/clavulaanzuur"

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@ -28,7 +28,7 @@ clipboard_export(x, sep = "\\t", dec = ".", na = "", header = TRUE,
\item{na}{the string to use for missing values in the data.}
\item{startrow}{\emph{n}th row to start importing from. For \code{clipboard_import}, when \code{header = TRUE} the import will start on row \code{startrow} \emph{below} the header.}
\item{startrow}{\emph{n}th row to start importing from. When \code{header = TRUE}, the import will start on row \code{startrow} \emph{below} the header.}
\item{as_vector}{a logical value indicating whether data consisting of only one column should be imported as vector using \code{\link[dplyr]{pull}}. This will strip off the header.}
@ -41,10 +41,28 @@ clipboard_export(x, sep = "\\t", dec = ".", na = "", header = TRUE,
data.frame
}
\description{
These are helper functions around \code{\link{read.table}} and \code{\link{write.table}} to import from and export to clipboard, with support for Windows, Linux and macOS. The data will be read and written as tab-separated by default, which makes it possible to copy and paste from other software like Excel and SPSS without further transformation.
These are helper functions around \code{\link{read.table}} and \code{\link{write.table}} to import from and export to clipboard with support for Windows, Linux and macOS. The data will be read and written as tab-separated by default, which makes it possible to copy and paste from other software like Excel and SPSS without further transformation. See Details for an example.
}
\details{
For \code{clipboard_export}, the reserved clipboard size for exporting will be set automatically to 125\% of the object size of \code{x}. This way, it is possible to export data with thousands of rows as the only limit will be your systems RAM.
For \code{clipboard_export()}, the reserved clipboard size for exporting will be set to 125\% of the object size of \code{x}. This way, it is possible to export data with thousands of rows as the only limit will be your systems RAM.
Example for copying from Excel:
\if{html}{
\out{<div style="text-align: left">}\figure{Excel_copy.png}\out{</div>}
}
\if{latex}{
\out{\begin{left}}\figure{Excel_copy.png}\out{\end{left}}
}
\cr
And pasting in R: \cr \cr
\code{> data <- clipboard_import()} \cr
\code{> data} \cr
\if{html}{
\out{<div style="text-align: left">}\figure{Excel_paste.png}\out{</div>}
}
\if{latex}{
\out{\begin{left}}\figure{Excel_paste.png}\out{\end{left}}
}
}
\keyword{clipboard}
\keyword{clipboard_export}

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@ -1,5 +1,5 @@
% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/first_isolates.R
% Please edit documentation in R/atc.R
\name{guess_bactid}
\alias{guess_bactid}
\title{Find bacteria ID based on genus/species}