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dr. M.S. (Matthijs) Berends
2018-04-03 16:07:32 +02:00
parent 4a47e59e6f
commit 3165c50d06
13 changed files with 226 additions and 158 deletions
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5
tests/testthat/test-first_isolates.R
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@@ -7,11 +7,6 @@ test_that("keyantibiotics work", {
expect_false(key_antibiotics_equal("SSS", "SIS", ignore_I = FALSE))
})
test_that("guess_bactid works", {
expect_equal(guess_bactid("E. coli"), "ESCCOL")
expect_equal(guess_bactid("Escherichia coli"), "ESCCOL")
})
test_that("first isolates work", {
# septic_patients contains 1960 out of 2000 first isolates
#septic_ptns <- septic_patients