From 31fd5db33bd4edd355cba0cdf8f706a7e2e2d903 Mon Sep 17 00:00:00 2001 From: github-actions <41898282+github-actions[bot]@users.noreply.github.com> Date: Sat, 11 Feb 2023 21:38:01 +0000 Subject: [PATCH] Built site for AMR: 1.8.2.9118@c51fb24 --- 404.html | 2 +- LICENSE-text.html | 2 +- articles/AMR.html | 595 ++- .../AMR_files/figure-html/disk_plots-1.png | Bin 38165 -> 38129 bytes .../figure-html/disk_plots_mo_ab-1.png | Bin 52705 -> 52877 bytes .../AMR_files/figure-html/mic_plots-1.png | Bin 28015 -> 28133 bytes .../AMR_files/figure-html/mic_plots-2.png | Bin 37024 -> 39044 bytes .../figure-html/mic_plots_mo_ab-1.png | Bin 38412 -> 37633 bytes .../figure-html/mic_plots_mo_ab-2.png | Bin 52173 -> 50744 bytes articles/AMR_files/figure-html/plot 1-1.png | Bin 42253 -> 41884 bytes articles/AMR_files/figure-html/plot 3-1.png | Bin 28460 -> 28491 bytes articles/AMR_files/figure-html/plot 4-1.png | Bin 78305 -> 78257 bytes articles/AMR_files/figure-html/plot 5-1.png | Bin 49914 -> 49868 bytes articles/EUCAST.html | 2 +- articles/MDR.html | 60 +- articles/PCA.html | 2 +- articles/SPSS.html | 4 +- articles/WHONET.html | 2 +- articles/datasets.html | 4 +- articles/index.html | 2 +- articles/resistance_predict.html | 2 +- articles/welcome_to_AMR.html | 2 +- authors.html | 2 +- index.html | 6 +- lang_cs.svg | 6 + lang_fi.svg | 6 + lang_no.svg | 13 + lang_ro.svg | 6 + news/index.html | 38 +- pkgdown.yml | 2 +- reference/AMR-deprecated.html | 2 +- reference/AMR-options.html | 4 +- reference/AMR.html | 2 +- reference/Rplot005.png | Bin 13121 -> 12815 bytes reference/Rplot006.png | Bin 12793 -> 12472 bytes reference/Rplot007.png | Bin 13478 -> 13475 bytes reference/Rplot008.png | Bin 17921 -> 18478 bytes reference/Rplot009.png | Bin 8480 -> 8425 bytes reference/WHOCC.html | 2 +- reference/WHONET.html | 2 +- reference/ab_from_text.html | 2 +- reference/ab_property.html | 2 +- reference/add_custom_antimicrobials.html | 2 +- reference/add_custom_microorganisms.html | 2 +- reference/age.html | 22 +- reference/age_groups.html | 2 +- reference/antibiogram-1.png | Bin 24603 -> 21812 bytes reference/antibiogram-2.png | Bin 26492 -> 24672 bytes reference/antibiogram-3.png | Bin 32347 -> 29269 bytes reference/antibiogram-4.png | Bin 39648 -> 37811 bytes reference/antibiogram.html | 183 +- reference/antibiotic_class_selectors.html | 138 +- reference/antibiotics.html | 2 +- reference/as.ab.html | 2 +- reference/as.av.html | 2 +- reference/as.disk.html | 2 +- reference/as.mic.html | 2 +- reference/as.mo.html | 2 +- reference/as.sir.html | 32 +- reference/atc_online.html | 2 +- reference/av_from_text.html | 2 +- reference/av_property.html | 2 +- reference/availability.html | 2 +- reference/bug_drug_combinations.html | 3759 ++++++++++++++++- reference/clinical_breakpoints.html | 2 +- reference/count.html | 2 +- reference/custom_eucast_rules.html | 2 +- reference/dosage.html | 2 +- reference/eucast_rules.html | 2 +- reference/example_isolates.html | 2 +- reference/example_isolates_unclean.html | 2 +- reference/first_isolate.html | 2 +- reference/g.test.html | 2 +- reference/get_episode.html | 83 +- reference/ggplot_pca.html | 2 +- reference/ggplot_sir.html | 2 +- reference/guess_ab_col.html | 2 +- reference/index.html | 2 +- reference/intrinsic_resistant.html | 2 +- reference/italicise_taxonomy.html | 2 +- reference/join.html | 2 +- reference/key_antimicrobials.html | 2 +- reference/kurtosis.html | 6 +- reference/like.html | 2 +- reference/mdro.html | 2 +- reference/mean_amr_distance.html | 69 +- reference/microorganisms.codes.html | 2 +- reference/microorganisms.html | 2 +- reference/mo_matching_score.html | 2 +- reference/mo_property.html | 2 +- reference/mo_source.html | 2 +- reference/pca.html | 2 +- reference/plot-1.png | Bin 27265 -> 27247 bytes reference/plot-2.png | Bin 26541 -> 27542 bytes reference/plot-3.png | Bin 28116 -> 28287 bytes reference/plot-4.png | Bin 39067 -> 39048 bytes reference/plot-5.png | Bin 38170 -> 39103 bytes reference/plot-6.png | Bin 37389 -> 38243 bytes reference/plot-7.png | Bin 38373 -> 37962 bytes reference/plot-8.png | Bin 54629 -> 55401 bytes reference/plot-9.png | Bin 26146 -> 26086 bytes reference/plot.html | 2 +- reference/proportion.html | 2 +- reference/random.html | 36 +- reference/resistance_predict.html | 2 +- reference/skewness.html | 4 +- reference/translate.html | 6 +- search.json | 2 +- 108 files changed, 4537 insertions(+), 659 deletions(-) create mode 100644 lang_cs.svg create mode 100644 lang_fi.svg create mode 100644 lang_no.svg create mode 100644 lang_ro.svg diff --git a/404.html b/404.html index 1d0c683f..f4474448 100644 --- a/404.html +++ b/404.html @@ -36,7 +36,7 @@ AMR (for R) - 1.8.2.9115 + 1.8.2.9118