diff --git a/DESCRIPTION b/DESCRIPTION
index dfe1bfa0..8a3d1b00 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -1,5 +1,5 @@
Package: AMR
-Version: 1.3.0.9018
+Version: 1.3.0.9019
Date: 2020-09-14
Title: Antimicrobial Resistance Analysis
Authors@R: c(
diff --git a/NEWS.md b/NEWS.md
index 9f837633..072b9d3d 100755
--- a/NEWS.md
+++ b/NEWS.md
@@ -1,4 +1,4 @@
-# AMR 1.3.0.9018
+# AMR 1.3.0.9019
## Last updated: 14 September 2020
Note: some changes in this version were suggested by anonymous reviewers from the journal we submitted our manuscipt to. We are those reviewers very grateful for going through our code so thoroughly!
diff --git a/R/mo.R b/R/mo.R
index 973d6420..085c4abd 100755
--- a/R/mo.R
+++ b/R/mo.R
@@ -314,7 +314,7 @@ exec_as.mo <- function(x,
res_df <- haystack[which(eval(substitute(needle), envir = haystack, enclos = parent.frame())), , drop = FALSE]
if (NROW(res_df) > 1) {
# sort the findings on matching score
- res_df <- res_df[order(mo_matching_score(x_backup[i], res_df[, "fullname", drop = TRUE]), decreasing = TRUE), , drop = FALSE]
+ res_df <- res_df[order(mo_matching_score(input, res_df[, "fullname", drop = TRUE]), decreasing = TRUE), , drop = FALSE]
}
res <- as.character(res_df[, column, drop = TRUE])
if (length(res) == 0) {
diff --git a/man/figures/logo.svg b/data-raw/logo.svg
similarity index 100%
rename from man/figures/logo.svg
rename to data-raw/logo.svg
diff --git a/docs/404.html b/docs/404.html
index 9859af5e..391dc047 100644
--- a/docs/404.html
+++ b/docs/404.html
@@ -49,7 +49,7 @@
-
+
@@ -81,7 +81,7 @@
AMR (for R)
- 1.3.0.9018
+ 1.3.0.9019
diff --git a/docs/LICENSE-text.html b/docs/LICENSE-text.html
index f60a221a..f2039627 100644
--- a/docs/LICENSE-text.html
+++ b/docs/LICENSE-text.html
@@ -49,7 +49,7 @@
-
+
@@ -81,7 +81,7 @@
AMR (for R)
- 1.3.0.9018
+ 1.3.0.9019
diff --git a/docs/articles/index.html b/docs/articles/index.html
index 56b82aad..806c3561 100644
--- a/docs/articles/index.html
+++ b/docs/articles/index.html
@@ -49,7 +49,7 @@
-
+
@@ -81,7 +81,7 @@
AMR (for R)
- 1.3.0.9018
+ 1.3.0.9019
diff --git a/docs/authors.html b/docs/authors.html
index 72e7cc75..473eb5d0 100644
--- a/docs/authors.html
+++ b/docs/authors.html
@@ -49,7 +49,7 @@
-
+
@@ -81,7 +81,7 @@
AMR (for R)
- 1.3.0.9018
+ 1.3.0.9019
diff --git a/docs/index.html b/docs/index.html
index c5dac937..55ffccdf 100644
--- a/docs/index.html
+++ b/docs/index.html
@@ -24,7 +24,7 @@
using evidence-based methods, like those defined by Leclercq et al. (2013)
<doi:10.1111/j.1469-0691.2011.03703.x> and the Clinical and Laboratory
Standards Institute (2014) <isbn: 1-56238-899-1>.">
-
+