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reference/ggplot_pca.html
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@ -7,7 +7,7 @@
<a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9232</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9233</small>
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
@ -79,7 +79,7 @@
<dl><dt id="arg-x">x<a class="anchor" aria-label="anchor" href="#arg-x"></a></dt>
<dd><p>An object returned by <code><a href="pca.html">pca()</a></code>, <code><a href="https://rdrr.io/r/stats/prcomp.html" class="external-link">prcomp()</a></code> or <code><a href="https://rdrr.io/r/stats/princomp.html" class="external-link">princomp()</a></code></p></dd>
<dd><p>An object returned by <code><a href="pca.html">pca()</a></code>, <code><a href="https://rdrr.io/r/stats/prcomp.html" class="external-link">prcomp()</a></code> or <code><a href="https://rdrr.io/r/stats/princomp.html" class="external-link">princomp()</a></code>.</p></dd>
<dt id="arg-choices">choices<a class="anchor" aria-label="anchor" href="#arg-choices"></a></dt>
@ -108,11 +108,11 @@
<dt id="arg-labels-textsize">labels_textsize<a class="anchor" aria-label="anchor" href="#arg-labels-textsize"></a></dt>
<dd><p>The size of the text used for the labels</p></dd>
<dd><p>The size of the text used for the labels.</p></dd>
<dt id="arg-labels-text-placement">labels_text_placement<a class="anchor" aria-label="anchor" href="#arg-labels-text-placement"></a></dt>
<dd><p>Adjustment factor the placement of the variable names (<code>&gt;=1</code> means further away from the arrow head)</p></dd>
<dd><p>Adjustment factor the placement of the variable names (<code>&gt;=1</code> means further away from the arrow head).</p></dd>
<dt id="arg-groups">groups<a class="anchor" aria-label="anchor" href="#arg-groups"></a></dt>
@ -120,59 +120,59 @@
<dt id="arg-ellipse">ellipse<a class="anchor" aria-label="anchor" href="#arg-ellipse"></a></dt>
<dd><p>A <a href="https://rdrr.io/r/base/logical.html" class="external-link">logical</a> to indicate whether a normal data ellipse should be drawn for each group (set with <code>groups</code>)</p></dd>
<dd><p>A <a href="https://rdrr.io/r/base/logical.html" class="external-link">logical</a> to indicate whether a normal data ellipse should be drawn for each group (set with <code>groups</code>).</p></dd>
<dt id="arg-ellipse-prob">ellipse_prob<a class="anchor" aria-label="anchor" href="#arg-ellipse-prob"></a></dt>
<dd><p>Statistical size of the ellipse in normal probability</p></dd>
<dd><p>Statistical size of the ellipse in normal probability.</p></dd>
<dt id="arg-ellipse-size">ellipse_size<a class="anchor" aria-label="anchor" href="#arg-ellipse-size"></a></dt>
<dd><p>The size of the ellipse line</p></dd>
<dd><p>The size of the ellipse line.</p></dd>
<dt id="arg-ellipse-alpha">ellipse_alpha<a class="anchor" aria-label="anchor" href="#arg-ellipse-alpha"></a></dt>
<dd><p>The alpha (transparency) of the ellipse line</p></dd>
<dd><p>The alpha (transparency) of the ellipse line.</p></dd>
<dt id="arg-points-size">points_size<a class="anchor" aria-label="anchor" href="#arg-points-size"></a></dt>
<dd><p>The size of the points</p></dd>
<dd><p>The size of the points.</p></dd>
<dt id="arg-points-alpha">points_alpha<a class="anchor" aria-label="anchor" href="#arg-points-alpha"></a></dt>
<dd><p>The alpha (transparency) of the points</p></dd>
<dd><p>The alpha (transparency) of the points.</p></dd>
<dt id="arg-arrows">arrows<a class="anchor" aria-label="anchor" href="#arg-arrows"></a></dt>
<dd><p>A <a href="https://rdrr.io/r/base/logical.html" class="external-link">logical</a> to indicate whether arrows should be drawn</p></dd>
<dd><p>A <a href="https://rdrr.io/r/base/logical.html" class="external-link">logical</a> to indicate whether arrows should be drawn.</p></dd>
<dt id="arg-arrows-colour">arrows_colour<a class="anchor" aria-label="anchor" href="#arg-arrows-colour"></a></dt>
<dd><p>The colour of the arrow and their text</p></dd>
<dd><p>The colour of the arrow and their text.</p></dd>
<dt id="arg-arrows-size">arrows_size<a class="anchor" aria-label="anchor" href="#arg-arrows-size"></a></dt>
<dd><p>The size (thickness) of the arrow lines</p></dd>
<dd><p>The size (thickness) of the arrow lines.</p></dd>
<dt id="arg-arrows-textsize">arrows_textsize<a class="anchor" aria-label="anchor" href="#arg-arrows-textsize"></a></dt>
<dd><p>The size of the text at the end of the arrows</p></dd>
<dd><p>The size of the text at the end of the arrows.</p></dd>
<dt id="arg-arrows-textangled">arrows_textangled<a class="anchor" aria-label="anchor" href="#arg-arrows-textangled"></a></dt>
<dd><p>A <a href="https://rdrr.io/r/base/logical.html" class="external-link">logical</a> whether the text at the end of the arrows should be angled</p></dd>
<dd><p>A <a href="https://rdrr.io/r/base/logical.html" class="external-link">logical</a> whether the text at the end of the arrows should be angled.</p></dd>
<dt id="arg-arrows-alpha">arrows_alpha<a class="anchor" aria-label="anchor" href="#arg-arrows-alpha"></a></dt>
<dd><p>The alpha (transparency) of the arrows and their text</p></dd>
<dd><p>The alpha (transparency) of the arrows and their text.</p></dd>
<dt id="arg-base-textsize">base_textsize<a class="anchor" aria-label="anchor" href="#arg-base-textsize"></a></dt>
<dd><p>The text size for all plot elements except the labels and arrows</p></dd>
<dd><p>The text size for all plot elements except the labels and arrows.</p></dd>
<dt id="arg--">...<a class="anchor" aria-label="anchor" href="#arg--"></a></dt>
<dd><p>Arguments passed on to functions</p></dd>
<dd><p>Arguments passed on to functions.</p></dd>
</dl></div>
<div class="section level2">