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(v1.3.0.9033) skimr fix

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dr. M.S. (Matthijs) Berends
2020-09-28 11:00:59 +02:00
parent 519aada54f
commit 36ec8b0d81
27 changed files with 71 additions and 70 deletions
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man/mo_matching_score.Rd
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@ -16,7 +16,7 @@ This helper function is used by \code{\link[=as.mo]{as.mo()}} to determine the m
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\section{Matching score for microorganisms}{
With ambiguous user input in \code{\link[=as.mo]{as.mo()}} and all the \code{\link[=mo_property]{mo_*}} functions, the returned results are chosen based on their matching score using \code{\link[=mo_matching_score]{mo_matching_score()}}. This matching score \eqn{m}, ranging from 0 to 100\%, is calculated as:
With ambiguous user input in \code{\link[=as.mo]{as.mo()}} and all the \code{\link[=mo_property]{mo_*}} functions, the returned results are chosen based on their matching score using \code{\link[=mo_matching_score]{mo_matching_score()}}. This matching score \eqn{m}, is calculated as:
\deqn{m_{(x, n)} = \frac{l_{n} - 0.5 \cdot \min \begin{cases}l_{n} \\ \operatorname{lev}(x, n)\end{cases}}{l_{n} \cdot p_{n} \cdot k_{n}}}{m(x, n) = ( l_n * min(l_n, lev(x, n) ) ) / ( l_n * p_n * k_n )}