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(v2.1.1.9279) fix documentation, add foreign S3 exports to functions

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dr. M.S. (Matthijs) Berends
2025-05-16 16:55:29 +02:00
parent 139f79d372
commit 38cebc1541
24 changed files with 292 additions and 239 deletions
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78
NAMESPACE
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@ -358,6 +358,84 @@ export(translate_AMR)
export(trimethoprims)
export(ureidopenicillins)
export(wisca)
if(getRversion() >= "3.0.0") S3method(cleaner::freq, mo)
if(getRversion() >= "3.0.0") S3method(cleaner::freq, sir)
if(getRversion() >= "3.0.0") S3method(ggplot2::autoplot, antibiogram)
if(getRversion() >= "3.0.0") S3method(ggplot2::autoplot, disk)
if(getRversion() >= "3.0.0") S3method(ggplot2::autoplot, mic)
if(getRversion() >= "3.0.0") S3method(ggplot2::autoplot, resistance_predict)
if(getRversion() >= "3.0.0") S3method(ggplot2::autoplot, sir)
if(getRversion() >= "3.0.0") S3method(ggplot2::fortify, disk)
if(getRversion() >= "3.0.0") S3method(ggplot2::fortify, mic)
if(getRversion() >= "3.0.0") S3method(ggplot2::fortify, resistance_predict)
if(getRversion() >= "3.0.0") S3method(ggplot2::fortify, sir)
if(getRversion() >= "3.0.0") S3method(knitr::knit_print, antibiogram)
if(getRversion() >= "3.0.0") S3method(knitr::knit_print, formatted_bug_drug_combinations)
if(getRversion() >= "3.0.0") S3method(pillar::pillar_shaft, ab)
if(getRversion() >= "3.0.0") S3method(pillar::pillar_shaft, av)
if(getRversion() >= "3.0.0") S3method(pillar::pillar_shaft, disk)
if(getRversion() >= "3.0.0") S3method(pillar::pillar_shaft, mic)
if(getRversion() >= "3.0.0") S3method(pillar::pillar_shaft, mo)
if(getRversion() >= "3.0.0") S3method(pillar::pillar_shaft, sir)
if(getRversion() >= "3.0.0") S3method(pillar::tbl_format_footer, antibiogram)
if(getRversion() >= "3.0.0") S3method(pillar::tbl_sum, antibiogram)
if(getRversion() >= "3.0.0") S3method(pillar::type_sum, ab)
if(getRversion() >= "3.0.0") S3method(pillar::type_sum, av)
if(getRversion() >= "3.0.0") S3method(pillar::type_sum, mic)
if(getRversion() >= "3.0.0") S3method(pillar::type_sum, mo)
if(getRversion() >= "3.0.0") S3method(pillar::type_sum, sir)
if(getRversion() >= "3.0.0") S3method(skimr::get_skimmers, disk)
if(getRversion() >= "3.0.0") S3method(skimr::get_skimmers, mic)
if(getRversion() >= "3.0.0") S3method(skimr::get_skimmers, mo)
if(getRversion() >= "3.0.0") S3method(skimr::get_skimmers, sir)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_arith, mic)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_cast, ab.character)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_cast, av.character)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_cast, character.ab)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_cast, character.amr_selector)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_cast, character.av)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_cast, character.disk)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_cast, character.mic)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_cast, character.mo)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_cast, character.sir)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_cast, disk.character)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_cast, disk.disk)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_cast, disk.double)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_cast, disk.integer)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_cast, double.disk)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_cast, double.mic)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_cast, factor.mic)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_cast, integer.disk)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_cast, integer.mic)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_cast, logical.amr_selector_any_all)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_cast, mic.character)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_cast, mic.double)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_cast, mic.factor)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_cast, mic.integer)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_cast, mic.mic)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_cast, mo.character)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_cast, sir.character)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_cast, sir.sir)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_math, mic)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_ptype2, ab.ab)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_ptype2, ab.default)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_ptype2, amr_selector.character)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_ptype2, amr_selector_any_all.logical)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_ptype2, av.av)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_ptype2, av.default)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_ptype2, character.amr_selector)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_ptype2, character.sir)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_ptype2, disk.default)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_ptype2, disk.disk)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_ptype2, logical.amr_selector_any_all)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_ptype2, mic.default)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_ptype2, mic.mic)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_ptype2, mo.default)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_ptype2, mo.mo)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_ptype2, sir.default)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_ptype2, sir.sir)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_ptype_abbr, disk)
if(getRversion() >= "3.0.0") S3method(vctrs::vec_ptype_full, disk)
importFrom(graphics,arrows)
importFrom(graphics,axis)
importFrom(graphics,barplot)