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(v3.0.1.9041) add breakpoints 2026

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dr. M.S. (Matthijs) Berends
2026-03-30 10:01:49 +02:00
parent 9c95aa455c
commit 3a736bc484
37 changed files with 5975 additions and 345 deletions
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18
data-raw/datasets/microorganisms.codes.txt
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@@ -2832,6 +2832,7 @@
"FU-" "B_FSBCTR"
"FUA.SP" "F_FUSRM"
"FUL" "B_FSBCTR_ULCR"
"FUO" "F_FUSRM_OXYS"
"FUR" "F_FUSRM"
"FUROXY" "F_FUSRM_OXYS"
"FURPET" "F_FUSRM_PTRL"
@@ -2936,6 +2937,7 @@
"GLO.SP" "B_GLBCT"
"GLOSAN" "B_GLBCT_SNGN"
"GLOSPP" "B_GLBCT"
"GLS" "B_GLSSR"
"GM+" "B_GRAMP"
"GM-" "B_GRAMN"
"GMO" "B_GEMLL_MRBL"
@@ -3026,7 +3028,6 @@
"HABSPP" "B_HMTBC"
"HAC" "B_AGGRG_ACTN"
"HACEK" "B_HACEK"
"HACEK" "B_HACEK"
"HAE" "B_HMPHL"
"HAE.SP" "B_HMPHL"
"HAEAEG" "B_HMPHL_AEGY"
@@ -3122,7 +3123,7 @@
"HPL" "B_HMPHL_PRPH"
"HPO" "F_OGATA"
"HPOSPP" "F_HNDRS_ASTR"
"HPR" "B_HMPHL_PRSS"
"HPR" "B_GLSSR_PRSS"
"HPU" "B_HLCBCT_PLLR"
"HPY" "B_HLCBCT_PYLR"
"HRB" "B_HRBSP"
@@ -3471,6 +3472,7 @@
"LQU" "B_LGNLL_QTRN"
"LRC" "B_LPTSP_INTR"
"LRE" "B_LCTBC_RETR"
"LRF" "B_LCTCC_RFFN"
"LRI" "B_LMNRL_RCHR"
"LRU" "B_LGNLL_RBRL"
"LSA" "B_LCTBC_SLVR"
@@ -3760,6 +3762,7 @@
"MNE" "B_MYCBC_NERM"
"MNL" "B_MRXLL_NNLQ"
"MNO" "B_MYCBC_NNCH"
"MNT" "B_MYCBC"
"MNV" "B_MNNHM_VRGN"
"MO-" "B_MRXLL"
"MO.BOV" "B_MRXLL_BOVS"
@@ -4295,6 +4298,7 @@
"PAT.SP" "B_PANTO"
"PAU" "B_SLMNL_ENTR_ENTR"
"PAV" "B_AVBCT_AVIM"
"PBA" "B_PSDCL_ALBA"
"PBC" "B_PRVTL_BCCL"
"PBE" "B_PSTRL_BTTY"
"PBI" "B_PRBCT"
@@ -4591,6 +4595,7 @@
"PSA" "F_PSDLL"
"PSA.SP" "F_PSDLL"
"PSASPP" "F_PSDLL"
"PSB" "B_PSDCL"
"PSC" "F_PSDCH"
"PSCSPP" "B_PSDCL"
"PSD" "B_STPHY_PSDN"
@@ -4706,6 +4711,7 @@
"RAH.SP" "B_RHNLL"
"RAHAQU" "B_RHNLL_AQTL"
"RAHSPP" "B_RHNLL"
"RAI" "B_RLSTN_INSD"
"RAK" "B_RTTSA_AKAR"
"RAL" "B_RLSTN"
"RAL.SP" "B_RLSTN"
@@ -4800,6 +4806,7 @@
"ROD" "B_RDNTB"
"RODPNE" "B_RDNTB_PNMT"
"RODSPP" "B_RDNTB"
"ROK" "B_ROTHI_KRST"
"ROL" "F_RHZPS_MCRS"
"ROM" "B_RSMNS"
"ROMMUC" "B_RSMNS"
@@ -5042,8 +5049,10 @@
"SAV" "B_SLMNL_ARCH"
"SB2" "B_STRPT_BOVS"
"SBA" "B_SLMNL_BRLL"
"SBC" "B_SLBCL"
"SBE" "B_SHWNL_BNTH"
"SBG" "B_SLMNL_BNGR"
"SBI" "B_SLBCL_SLVS"
"SBL" "B_SLMNL_BLCK"
"SBM" "B_SLMNL_BVSM"
"SBN" "B_SLMNL_BBRG"
@@ -5078,6 +5087,7 @@
"SCS" "F_SCLCB_CNST"
"SCT" "B_STRPT_CNST"
"SCU" "B_STPHY_CRNS"
"SCV" "F_SCPLR_VCLS"
"SCY" "F_SCYTL"
"SCYSPP" "F_SCYTL"
"SD1" "B_SHGLL_DYSN"
@@ -5656,6 +5666,7 @@
"TAYSPP" "B_TYLRL"
"TBE" "F_GTRCH_RDLL"
"TBESPP" "F_TRCHS"
"TBH" "F_TRCHP_BNHM"
"TBN" "B_TRPRL_BRNR"
"TCA" "F_DBRYM_CHVL"
"TCASPP" "F_CANDD"
@@ -5841,6 +5852,8 @@
"TYASPP" "F_TRCHP"
"TYE" "P_TRYPN_JNSN"
"TYI" "F_TRCHP_INDT"
"TYM" "B_TRPHR"
"TYW" "B_TRPHR_WHPP"
"ULO" "F_ULCLD"
"UNK" "UNKNOWN"
"UPEC" "B_ESCHR_COLI"
@@ -5850,6 +5863,7 @@
"UREPAR" "B_URPLS_PRVM"
"URESPP" "B_URPLS"
"UREURE" "B_URPLS_URLY"
"URP" "B_URPLS_PRVM"
"UUR" "B_URPLS_URLY"
"V.ALG" "B_VIBRI_ALGN"
"V.CHO" "B_VIBRI_CHLR"