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(v1.7.1.9057) NAs in get_episode()

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dr. M.S. (Matthijs) Berends
2021-12-02 13:32:14 +01:00
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NEWS.md
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# `AMR` 1.7.1.9056
## <small>Last updated: 29 November 2021</small>
# `AMR` 1.7.1.9057
## <small>Last updated: 2 December 2021</small>
### Breaking changes
* Removed `p_symbol()` and all `filter_*()` functions (except for `filter_first_isolate()`), which were all deprecated in a previous package version
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* The `mdro()` function now returns `NA` for all rows that have no test results
* The `species_id` column in the `microorganisms` data set now only contains LPSN record numbers. For this reason, this column is now numeric instead of a character, and `mo_url()` has been updated to reflect this change.
* Fixed a small bug in the functions `get_episode()` and `is_new_episode()`
* `get_episode()` and `is_new_episode()` can now cope with `NA`s
### Other
* This package is now being maintained by two epidemiologists and a data scientist from two different non-profit healthcare organisations. All functions in this package are now all considered to be stable. Updates to the AMR interpretation rules (such as by EUCAST and CLSI), the microbial taxonomy, and the antibiotic dosages will all be updated every 6 to 12 months from now on.