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reference/custom_mdro_guideline.html | 2 +- reference/dosage.html | 2 +- reference/esbl_isolates.html | 2 +- reference/eucast_rules.html | 2 +- reference/example_isolates.html | 2 +- reference/example_isolates_unclean.html | 2 +- reference/export_ncbi_biosample.html | 2 +- reference/first_isolate.html | 2 +- reference/g.test.html | 2 +- reference/get_episode.html | 2 +- reference/ggplot_pca.html | 2 +- reference/ggplot_sir-10.png | Bin 46478 -> 0 bytes reference/ggplot_sir-3.png | Bin 46245 -> 49232 bytes reference/ggplot_sir-4.png | Bin 36819 -> 21050 bytes reference/ggplot_sir-5.png | Bin 48805 -> 45626 bytes reference/ggplot_sir-6.png | Bin 34360 -> 0 bytes reference/ggplot_sir-7.png | Bin 21050 -> 0 bytes reference/ggplot_sir-8.png | Bin 36287 -> 0 bytes reference/ggplot_sir-9.png | Bin 45626 -> 0 bytes reference/ggplot_sir.html | 22 ++++---- reference/guess_ab_col.html | 2 +- reference/index.html | 2 +- reference/intrinsic_resistant.html | 2 +- reference/italicise_taxonomy.html | 2 +- reference/join.html | 2 +- reference/key_antimicrobials.html | 2 +- reference/kurtosis.html | 2 +- reference/like.html | 2 +- reference/mdro.html | 2 +- reference/mean_amr_distance.html | 2 +- reference/microorganisms.codes.html | 2 +- reference/microorganisms.groups.html | 2 +- reference/microorganisms.html | 2 +- reference/mo_matching_score.html | 2 +- reference/mo_property.html | 2 +- reference/mo_source.html | 2 +- reference/pca.html | 2 +- reference/plot-10.png | Bin 67610 -> 78255 bytes reference/plot-11.png | Bin 19312 -> 74249 bytes reference/plot-12.png | Bin 77134 -> 19312 bytes reference/plot-13.png | Bin 94826 -> 77202 bytes reference/plot-14.png | Bin 80583 -> 95453 bytes reference/plot-15.png | Bin 38850 -> 81118 bytes reference/plot-16.png | Bin 55112 -> 38850 bytes reference/plot-17.png | Bin 35083 -> 55112 bytes reference/plot-18.png | Bin 51225 -> 35083 bytes reference/plot-19.png | Bin 49038 -> 51225 bytes reference/plot-2.png | Bin 59147 -> 62752 bytes reference/plot-20.png | Bin 44054 -> 49038 bytes reference/plot-21.png | Bin 0 -> 44054 bytes reference/plot-3.png | Bin 53099 -> 61489 bytes reference/plot-4.png | Bin 25019 -> 56174 bytes reference/plot-5.png | Bin 27974 -> 25019 bytes reference/plot-6.png | Bin 30826 -> 27974 bytes reference/plot-7.png | Bin 26190 -> 30826 bytes reference/plot-8.png | Bin 33705 -> 26190 bytes reference/plot-9.png | Bin 72895 -> 33705 bytes reference/plot.html | 49 ++++++++++-------- reference/proportion.html | 2 +- reference/random.html | 2 +- reference/resistance_predict.html | 2 +- reference/skewness.html | 2 +- reference/top_n_microorganisms.html | 2 +- reference/translate.html | 2 +- search.json | 2 +- 115 files changed, 158 insertions(+), 149 deletions(-) delete mode 100644 articles/WHONET_files/figure-html/unnamed-chunk-7-1.png delete mode 100644 reference/age_groups-1.png delete mode 100644 reference/ggplot_sir-10.png delete mode 100644 reference/ggplot_sir-6.png delete mode 100644 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