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Built site for AMR: 2.1.1@4c11a7b

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<a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.0.9004</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1</small>
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
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</div>
<div class="section level2">
<h2 id="introduction-to-the-package">Introduction to the package<a class="anchor" aria-label="anchor" href="#introduction-to-the-package"></a></h2>
<p class="section-desc"></p><p>Please find the introduction to (and some general information about) our package here.</p>
</div><div id="" class="section level2">
<dl><dt>
<code><a href="AMR.html">AMR</a></code> <code><a href="AMR.html">AMR-package</a></code>
</dt>
<dd>The <code>AMR</code> Package</dd>
</dl></div><div class="section level2">
<h2 id="preparing-data-microorganisms">Preparing data: microorganisms<a class="anchor" aria-label="anchor" href="#preparing-data-microorganisms"></a></h2>
<p class="section-desc"></p><p>These functions are meant to get taxonomically valid properties of microorganisms from any input, but also properties derived from taxonomy, such as the Gram stain (<code><a href="../reference/mo_property.html">mo_gramstain()</a></code>) , or <code><a href="../reference/mo_property.html">mo_is_yeast()</a></code>. Use <code><a href="../reference/mo_source.html">mo_source()</a></code> to teach this package how to translate your own codes to valid microorganisms, and use `add_custom_microorganisms() to add your own custom microorganisms to this package.</p>
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<dl><dt>
<code><a href="AMR.html">AMR</a></code> <code><a href="AMR.html">AMR-package</a></code>
</dt>
<dd>The <code>AMR</code> Package</dd>
</dl><dl><dt>
<code><a href="example_isolates.html">example_isolates</a></code>
</dt>
<dd>Data Set with 2 000 Example Isolates</dd>