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2026-03-03 14:52:15 +00:00
parent 6f0dc96d0d
commit 3c74d99480
96 changed files with 363 additions and 272 deletions
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reference/as.mic.md
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@@ -197,7 +197,7 @@ as.mic("<=0.002; S")
#> Class 'mic'
#> [1] <=0.002
# mathematical processing treats MICs as numeric values
# mathematical processing treats MICs as, and returns, numeric values
fivenum(mic_data)
#> [1] 0.128 1.000 8.000 16.000 32.000
quantile(mic_data)
@@ -211,6 +211,13 @@ rescale_mic(mic_data, mic_range = c(4, 16))
#> Class 'mic'
#> [1] >=16 <=4 <=4 <=4 8 <=4 8 >=16 >=16
# round up to nearest log2 level, e.g. for CLSI breakpoint interpretation:
c(1:8)
#> [1] 1 2 3 4 5 6 7 8
as.mic(c(1:8), round_to_next_log2 = TRUE)
#> Class 'mic'
#> [1] 1 2 4 4 8 8 8 8
# interpret MIC values
as.sir(
x = as.mic(2),