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count_* functions

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dr. M.S. (Matthijs) Berends
2018-08-22 00:02:26 +02:00
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NEWS.md
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# 0.3.0
# 0.3.0.90xx (latest development version)
#### New
* Functions `count_R`, `count_IR`, `count_I`, `count_SI` and `count_S` to selectively count resistant or susceptibile isolates
* Function `is.rsi.eligible` to check for columns that have valid antimicrobial results, but do not have the `rsi` class yet. Transform the columns of your raw data with: `data %>% mutate_at(is.rsi.eligible, as.rsi)`
#### Changed
* Added parameters `minimum` and `as_percent` to `portion_df`
* Edited `ggplot_rsi` and `geom_rsi` so they can cope with `count_df`. The new `fun` parameter has value `portion_df` at default, but can be set to `count_df`.
* Fix for `ggplot_rsi` when the `ggplot2` was not loaded
# 0.3.0 (latest stable version)
**Published on CRAN: 2018-08-14**
#### New