P281424/AMR
1
0
Fork 0
mirror of https://github.com/msberends/AMR.git synced 2026-06-24 08:56:21 +02:00
Code Releases Activity

(v3.0.1.9059) Update taxonomy of microorganisms

Browse Source
This commit is contained in:
Matthijs Berends
2026-06-23 01:38:13 +02:00
committed by GitHub
parent 0af3f84655
commit 3f9f931777
123 changed files with 121928 additions and 94162 deletions
Download Patch File Download Diff File Expand all files Collapse all files

2
R/proportion.R
View File

@@ -100,7 +100,7 @@
#' ```
#'
#' Using `only_all_tested` has no impact when only using one antibiotic as input.
#' @source **M39 Analysis and Presentation of Cumulative Antimicrobial Susceptibility Test Data, 5th Edition**, 2022, *Clinical and Laboratory Standards Institute (CLSI)*. <https://clsi.org/standards/products/microbiology/documents/m39/>.
#' @references **M39 Analysis and Presentation of Cumulative Antimicrobial Susceptibility Test Data, 5th Edition**, 2022, *Clinical and Laboratory Standards Institute (CLSI)*. <https://clsi.org/standards/products/microbiology/documents/m39/>.
#' @seealso [AMR::count()] to count resistant and susceptible isolates.
#' @return A [double] or, when `as_percent = TRUE`, a [character].
#' @rdname proportion