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(v2.1.1.9228) repo cleaning

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dr. M.S. (Matthijs) Berends
2025-03-28 11:17:49 +01:00
parent d77ad6bd6e
commit 49da312506
116 changed files with 75811 additions and 496 deletions
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3
tests/testthat/test-eucast_rules.R
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@ -178,6 +178,7 @@ test_that("test-eucast_rules.R", {
cefotax = as.sir(c("S", "S"))
),
ampc_cephalosporin_resistance = TRUE,
rules = "expert",
overwrite = TRUE,
info = FALSE
)$cefotax,
@ -191,6 +192,7 @@ test_that("test-eucast_rules.R", {
cefotax = as.sir(c("S", "S"))
),
ampc_cephalosporin_resistance = NA,
rules = "expert",
overwrite = TRUE,
info = FALSE
)$cefotax,
@ -203,6 +205,7 @@ test_that("test-eucast_rules.R", {
mo = c("Escherichia coli", "Enterobacter cloacae"),
cefotax = as.sir(c("S", "S"))
),
rules = "expert",
ampc_cephalosporin_resistance = NULL,
overwrite = TRUE,
info = FALSE