mirror of
https://github.com/msberends/AMR.git
synced 2025-07-27 17:07:54 +02:00
Built site for AMR@2.1.1.9103: 87271d2
This commit is contained in:
@ -16,8 +16,8 @@
|
||||
<link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet">
|
||||
<script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/Lato-0.4.9/font.css" rel="stylesheet">
|
||||
<link href="../deps/Fira_Code-0.4.9/font.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.4.2/css/all.min.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.4.2/css/v4-shims.min.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.5.2/css/all.min.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.5.2/css/v4-shims.min.css" rel="stylesheet">
|
||||
<script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><link href="../extra.css" rel="stylesheet">
|
||||
<script src="../extra.js"></script><meta property="og:title" content="How to conduct AMR data analysis">
|
||||
</head>
|
||||
@ -87,7 +87,7 @@
|
||||
website update since they are based on randomly created values and the
|
||||
page was written in <a href="https://rmarkdown.rstudio.com/" class="external-link">R
|
||||
Markdown</a>. However, the methodology remains unchanged. This page was
|
||||
generated on 18 October 2024.</p>
|
||||
generated on 21 November 2024.</p>
|
||||
<div class="section level2">
|
||||
<h2 id="introduction">Introduction<a class="anchor" aria-label="anchor" href="#introduction"></a>
|
||||
</h2>
|
||||
@ -143,21 +143,21 @@ make the structure of your data generally look like this:</p>
|
||||
</tr></thead>
|
||||
<tbody>
|
||||
<tr class="odd">
|
||||
<td align="center">2024-10-18</td>
|
||||
<td align="center">2024-11-21</td>
|
||||
<td align="center">abcd</td>
|
||||
<td align="center">Escherichia coli</td>
|
||||
<td align="center">S</td>
|
||||
<td align="center">S</td>
|
||||
</tr>
|
||||
<tr class="even">
|
||||
<td align="center">2024-10-18</td>
|
||||
<td align="center">2024-11-21</td>
|
||||
<td align="center">abcd</td>
|
||||
<td align="center">Escherichia coli</td>
|
||||
<td align="center">S</td>
|
||||
<td align="center">R</td>
|
||||
</tr>
|
||||
<tr class="odd">
|
||||
<td align="center">2024-10-18</td>
|
||||
<td align="center">2024-11-21</td>
|
||||
<td align="center">efgh</td>
|
||||
<td align="center">Escherichia coli</td>
|
||||
<td align="center">R</td>
|
||||
|
@ -16,8 +16,8 @@
|
||||
<link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet">
|
||||
<script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/Lato-0.4.9/font.css" rel="stylesheet">
|
||||
<link href="../deps/Fira_Code-0.4.9/font.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.4.2/css/all.min.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.4.2/css/v4-shims.min.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.5.2/css/all.min.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.5.2/css/v4-shims.min.css" rel="stylesheet">
|
||||
<script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><link href="../extra.css" rel="stylesheet">
|
||||
<script src="../extra.js"></script><meta property="og:title" content="AMR for Python">
|
||||
</head>
|
||||
|
@ -16,8 +16,8 @@
|
||||
<link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet">
|
||||
<script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/Lato-0.4.9/font.css" rel="stylesheet">
|
||||
<link href="../deps/Fira_Code-0.4.9/font.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.4.2/css/all.min.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.4.2/css/v4-shims.min.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.5.2/css/all.min.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.5.2/css/v4-shims.min.css" rel="stylesheet">
|
||||
<script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><link href="../extra.css" rel="stylesheet">
|
||||
<script src="../extra.js"></script><meta property="og:title" content="How to apply EUCAST rules">
|
||||
</head>
|
||||
|
@ -16,8 +16,8 @@
|
||||
<link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet">
|
||||
<script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/Lato-0.4.9/font.css" rel="stylesheet">
|
||||
<link href="../deps/Fira_Code-0.4.9/font.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.4.2/css/all.min.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.4.2/css/v4-shims.min.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.5.2/css/all.min.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.5.2/css/v4-shims.min.css" rel="stylesheet">
|
||||
<script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><link href="../extra.css" rel="stylesheet">
|
||||
<script src="../extra.js"></script><meta property="og:title" content="How to determine multi-drug resistance (MDR)">
|
||||
</head>
|
||||
|
@ -16,8 +16,8 @@
|
||||
<link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet">
|
||||
<script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/Lato-0.4.9/font.css" rel="stylesheet">
|
||||
<link href="../deps/Fira_Code-0.4.9/font.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.4.2/css/all.min.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.4.2/css/v4-shims.min.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.5.2/css/all.min.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.5.2/css/v4-shims.min.css" rel="stylesheet">
|
||||
<script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><link href="../extra.css" rel="stylesheet">
|
||||
<script src="../extra.js"></script><meta property="og:title" content="How to conduct principal component analysis (PCA) for AMR">
|
||||
</head>
|
||||
|
@ -16,8 +16,8 @@
|
||||
<link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet">
|
||||
<script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/Lato-0.4.9/font.css" rel="stylesheet">
|
||||
<link href="../deps/Fira_Code-0.4.9/font.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.4.2/css/all.min.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.4.2/css/v4-shims.min.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.5.2/css/all.min.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.5.2/css/v4-shims.min.css" rel="stylesheet">
|
||||
<script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><link href="../extra.css" rel="stylesheet">
|
||||
<script src="../extra.js"></script><meta property="og:title" content="How to work with WHONET data">
|
||||
</head>
|
||||
|
@ -16,8 +16,8 @@
|
||||
<link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet">
|
||||
<script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/Lato-0.4.9/font.css" rel="stylesheet">
|
||||
<link href="../deps/Fira_Code-0.4.9/font.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.4.2/css/all.min.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.4.2/css/v4-shims.min.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.5.2/css/all.min.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.5.2/css/v4-shims.min.css" rel="stylesheet">
|
||||
<script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><link href="../extra.css" rel="stylesheet">
|
||||
<script src="../extra.js"></script><meta property="og:title" content="Data sets for download / own use">
|
||||
</head>
|
||||
@ -76,7 +76,7 @@
|
||||
<main id="main" class="col-md-9"><div class="page-header">
|
||||
<img src="../logo.svg" class="logo" alt=""><h1>Data sets for download / own use</h1>
|
||||
|
||||
<h4 data-toc-skip class="date">18 October 2024</h4>
|
||||
<h4 data-toc-skip class="date">21 November 2024</h4>
|
||||
|
||||
<small class="dont-index">Source: <a href="https://github.com/msberends/AMR/blob/main/vignettes/datasets.Rmd" class="external-link"><code>vignettes/datasets.Rmd</code></a></small>
|
||||
<div class="d-none name"><code>datasets.Rmd</code></div>
|
||||
|
@ -1,5 +1,5 @@
|
||||
<!DOCTYPE html>
|
||||
<!-- Generated by pkgdown: do not edit by hand --><html lang="en"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><title>Articles • AMR (for R)</title><!-- favicons --><link rel="icon" type="image/png" sizes="16x16" href="../favicon-16x16.png"><link rel="icon" type="image/png" sizes="32x32" href="../favicon-32x32.png"><link rel="apple-touch-icon" type="image/png" sizes="180x180" href="../apple-touch-icon.png"><link rel="apple-touch-icon" type="image/png" sizes="120x120" href="../apple-touch-icon-120x120.png"><link rel="apple-touch-icon" type="image/png" sizes="76x76" href="../apple-touch-icon-76x76.png"><link rel="apple-touch-icon" type="image/png" sizes="60x60" href="../apple-touch-icon-60x60.png"><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/Lato-0.4.9/font.css" rel="stylesheet"><link href="../deps/Fira_Code-0.4.9/font.css" rel="stylesheet"><link href="../deps/font-awesome-6.4.2/css/all.min.css" rel="stylesheet"><link href="../deps/font-awesome-6.4.2/css/v4-shims.min.css" rel="stylesheet"><script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><link href="../extra.css" rel="stylesheet"><script src="../extra.js"></script><meta property="og:title" content="Articles"><meta property="og:image" content="https://msberends.github.io/AMR/logo.svg"></head><body>
|
||||
<!-- Generated by pkgdown: do not edit by hand --><html lang="en"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><title>Articles • AMR (for R)</title><!-- favicons --><link rel="icon" type="image/png" sizes="16x16" href="../favicon-16x16.png"><link rel="icon" type="image/png" sizes="32x32" href="../favicon-32x32.png"><link rel="apple-touch-icon" type="image/png" sizes="180x180" href="../apple-touch-icon.png"><link rel="apple-touch-icon" type="image/png" sizes="120x120" href="../apple-touch-icon-120x120.png"><link rel="apple-touch-icon" type="image/png" sizes="76x76" href="../apple-touch-icon-76x76.png"><link rel="apple-touch-icon" type="image/png" sizes="60x60" href="../apple-touch-icon-60x60.png"><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/Lato-0.4.9/font.css" rel="stylesheet"><link href="../deps/Fira_Code-0.4.9/font.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/all.min.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/v4-shims.min.css" rel="stylesheet"><script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><link href="../extra.css" rel="stylesheet"><script src="../extra.js"></script><meta property="og:title" content="Articles"><meta property="og:image" content="https://msberends.github.io/AMR/logo.svg"></head><body>
|
||||
<a href="#main" class="visually-hidden-focusable">Skip to contents</a>
|
||||
|
||||
|
||||
|
@ -16,8 +16,8 @@
|
||||
<link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet">
|
||||
<script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/Lato-0.4.9/font.css" rel="stylesheet">
|
||||
<link href="../deps/Fira_Code-0.4.9/font.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.4.2/css/all.min.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.4.2/css/v4-shims.min.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.5.2/css/all.min.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.5.2/css/v4-shims.min.css" rel="stylesheet">
|
||||
<script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><link href="../extra.css" rel="stylesheet">
|
||||
<script src="../extra.js"></script><meta property="og:title" content="How to predict antimicrobial resistance">
|
||||
</head>
|
||||
|
@ -16,8 +16,8 @@
|
||||
<link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet">
|
||||
<script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/Lato-0.4.9/font.css" rel="stylesheet">
|
||||
<link href="../deps/Fira_Code-0.4.9/font.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.4.2/css/all.min.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.4.2/css/v4-shims.min.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.5.2/css/all.min.css" rel="stylesheet">
|
||||
<link href="../deps/font-awesome-6.5.2/css/v4-shims.min.css" rel="stylesheet">
|
||||
<script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><link href="../extra.css" rel="stylesheet">
|
||||
<script src="../extra.js"></script><meta property="og:title" content="Welcome to the `AMR` package">
|
||||
</head>
|
||||
|
Reference in New Issue
Block a user