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styled, unit test fix
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@ -9,7 +9,7 @@
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# (c) 2018-2022 Berends MS, Luz CF et al. #
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# Developed at the University of Groningen, the Netherlands, in #
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# collaboration with non-profit organisations Certe Medical #
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# Diagnostics & Advice, and University Medical Center Groningen. #
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# Diagnostics & Advice, and University Medical Center Groningen. #
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# #
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# This R package is free software; you can freely use and distribute #
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# it for both personal and commercial purposes under the terms of the #
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@ -46,7 +46,8 @@ import_functions <- c(
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"read_html" = "xml2",
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"right_join" = "dplyr",
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"semi_join" = "dplyr",
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"showQuestion" = "rstudioapi")
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"showQuestion" = "rstudioapi"
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)
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# functions that are called directly
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call_functions <- c(
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@ -84,9 +85,10 @@ call_functions <- c(
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)
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if (AMR:::pkg_is_available("skimr", also_load = FALSE, min_version = "2.0.0")) {
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call_functions <- c(call_functions,
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# skimr
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"inline_hist" = "skimr",
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"sfl" = "skimr")
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# skimr
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"inline_hist" = "skimr",
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"sfl" = "skimr"
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)
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}
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extended_functions <- c(
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@ -105,12 +107,15 @@ for (i in seq_len(length(import_functions))) {
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pkg <- unname(import_functions[i])
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# function should exist in foreign pkg namespace
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if (AMR:::pkg_is_available(pkg,
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also_load = FALSE,
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min_version = if (pkg == "dplyr") "1.0.0" else NULL)) {
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also_load = FALSE,
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min_version = if (pkg == "dplyr") "1.0.0" else NULL
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)) {
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tst <- !is.null(AMR:::import_fn(name = fn, pkg = pkg, error_on_fail = FALSE))
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expect_true(tst,
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info = ifelse(tst,
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"All external function references exist.",
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paste0("Function ", pkg, "::", fn, "() does not exist anymore")))
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info = ifelse(tst,
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"All external function references exist.",
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paste0("Function ", pkg, "::", fn, "() does not exist anymore")
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)
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)
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}
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}
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