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(v1.3.0.9035) mdro() for EUCAST 3.2, examples cleanup
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7
R/disk.R
7
R/disk.R
@ -33,7 +33,7 @@
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#' @seealso [as.rsi()]
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#' @inheritSection AMR Read more on our website!
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#' @examples
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#' \dontrun{
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#' \donttest{
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#' # transform existing disk zones to the `disk` class
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#' library(dplyr)
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#' df <- data.frame(microorganism = "E. coli",
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@ -41,8 +41,9 @@
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#' CIP = 14,
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#' GEN = 18,
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#' TOB = 16)
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#' df <- df %>% mutate_at(vars(AMP:TOB), as.disk)
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#' df
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#' df[, 2:5] <- lapply(df[, 2:5], as.disk)
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#' # same with dplyr:
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#' # df %>% mutate(across(AMP:TOB, as.disk))
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#'
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#' # interpret disk values, see ?as.rsi
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#' as.rsi(x = as.disk(18),
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