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(v1.3.0.9035) mdro() for EUCAST 3.2, examples cleanup

This commit is contained in:
2020-09-29 23:35:46 +02:00
parent 68e6e1e329
commit 4e0374af29
94 changed files with 1143 additions and 1165 deletions

View File

@ -157,15 +157,6 @@
#' group_by(hospital_id) %>%
#' proportion_df(translate = FALSE)
#' }
#'
#' \dontrun{
#' # calculate current empiric combination therapy of Helicobacter gastritis:
#' my_table %>%
#' filter(first_isolate == TRUE,
#' genus == "Helicobacter") %>%
#' summarise(p = susceptibility(AMX, MTR), # amoxicillin with metronidazole
#' n = count_all(AMX, MTR))
#' }
resistance <- function(...,
minimum = 30,
as_percent = FALSE,