P281424/AMR
1
0
Fork 0
mirror of https://github.com/msberends/AMR.git synced 2025-07-08 09:51:48 +02:00
Code Releases Activity

(v1.3.0.9022) mo_matching_score(), poorman update, as.rsi() fix

Browse Source
This commit is contained in:
dr. M.S. (Matthijs) Berends
2020-09-18 16:05:53 +02:00
parent 89401ede9f
commit 4e40e42011
138 changed files with 2923 additions and 1472 deletions
Download Patch File Download Diff File Expand all files Collapse all files

68
R/aa_helper_functions.R
View File

@ -19,41 +19,12 @@
# Visit our website for more info: https://msberends.github.io/AMR. #
# ==================================================================== #
# functions from dplyr, will perhaps become poorman
distinct <- function(.data, ..., .keep_all = FALSE) {
check_is_dataframe(.data)
if ("grouped_data" %in% class(.data)) {
distinct.grouped_data(.data, ..., .keep_all = .keep_all)
} else {
distinct.default(.data, ..., .keep_all = .keep_all)
}
}
distinct.default <- function(.data, ..., .keep_all = FALSE) {
names <- rownames(.data)
rownames(.data) <- NULL
if (length(deparse_dots(...)) == 0) {
selected <- .data
} else {
selected <- select(.data, ...)
}
rows <- as.integer(rownames(unique(selected)))
if (isTRUE(.keep_all)) {
res <- .data[rows, , drop = FALSE]
} else {
res <- selected[rows, , drop = FALSE]
}
rownames(res) <- names[rows]
res
}
distinct.grouped_data <- function(.data, ..., .keep_all = FALSE) {
apply_grouped_function(.data, "distinct", ..., .keep_all = .keep_all)
}
# faster implementation of left_join than using merge() by poorman - we use match():
left_join <- function(x, y, by = NULL, suffix = c(".x", ".y")) {
pm_left_join <- function(x, y, by = NULL, suffix = c(".x", ".y")) {
if (is.null(by)) {
by <- intersect(names(x), names(y))[1L]
if (is.na(by)) {
stop_("no common column found for left_join()")
stop_("no common column found for pm_left_join()")
}
join_message(by)
} else if (!is.null(names(by))) {
@ -77,17 +48,28 @@ left_join <- function(x, y, by = NULL, suffix = c(".x", ".y")) {
rownames(merged) <- NULL
merged
}
filter_join_worker <- function(x, y, by = NULL, type = c("anti", "semi")) {
type <- match.arg(type, choices = c("anti", "semi"), several.ok = FALSE)
if (is.null(by)) {
by <- intersect(names(x), names(y))
join_message(by)
# pm_filter_join_worker <- function(x, y, by = NULL, type = c("anti", "semi")) {
# type <- match.arg(type, choices = c("anti", "semi"), several.ok = FALSE)
# if (is.null(by)) {
# by <- intersect(names(x), names(y))
# join_message(by)
# }
# rows <- interaction(x[, by]) %in% interaction(y[, by])
# if (type == "anti") rows <- !rows
# res <- x[rows, , drop = FALSE]
# rownames(res) <- NULL
# res
# }
quick_case_when <- function(...) {
vectors <- list(...)
split <- lapply(vectors, function(x) unlist(strsplit(paste(deparse(x), collapse = ""), "~", fixed = TRUE)))
for (i in seq_len(length(vectors))) {
if (eval(parse(text = split[[i]][1]), envir = parent.frame())) {
return(eval(parse(text = split[[i]][2]), envir = parent.frame()))
}
}
rows <- interaction(x[, by]) %in% interaction(y[, by])
if (type == "anti") rows <- !rows
res <- x[rows, , drop = FALSE]
rownames(res) <- NULL
res
return(NA)
}
# No export, no Rd
@ -165,7 +147,7 @@ search_type_in_df <- function(x, type) {
if (any(colnames(x) %like% "^(specimen date|specimen_date|spec_date)")) {
# WHONET support
found <- sort(colnames(x)[colnames(x) %like% "^(specimen date|specimen_date|spec_date)"])[1]
if (!any(class(pull(x, found)) %in% c("Date", "POSIXct"))) {
if (!any(class(pm_pull(x, found)) %in% c("Date", "POSIXct"))) {
stop(font_red(paste0("ERROR: Found column `", font_bold(found), "` to be used as input for `col_", type,
"`, but this column contains no valid dates. Transform its values to valid dates first.")),
call. = FALSE)
@ -461,7 +443,7 @@ font_stripstyle <- function(x) {
gsub("(?:(?:\\x{001b}\\[)|\\x{009b})(?:(?:[0-9]{1,3})?(?:(?:;[0-9]{0,3})*)?[A-M|f-m])|\\x{001b}[A-M]", "", x, perl = TRUE)
}
progress_estimated <- function(n = 1, n_min = 0, ...) {
progress_ticker <- function(n = 1, n_min = 0, ...) {
if (!interactive() || n < n_min) {
pb <- list()
pb$tick <- function() {