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(v1.4.0.9001) is_gram_positive(), is_gram_negative(), parameter hardening

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dr. M.S. (Matthijs) Berends
2020-10-19 17:09:19 +02:00
parent 833a1be36d
commit 4e9ccb4435
76 changed files with 969 additions and 491 deletions
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9
man/age.Rd
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@ -4,16 +4,18 @@
\alias{age}
\title{Age in years of individuals}
\usage{
age(x, reference = Sys.Date(), exact = FALSE, na.rm = FALSE)
age(x, reference = Sys.Date(), exact = FALSE, na.rm = FALSE, ...)
}
\arguments{
\item{x}{date(s), will be coerced with \code{\link[=as.POSIXlt]{as.POSIXlt()}}}
\item{reference}{reference date(s) (defaults to today), will be coerced with \code{\link[=as.POSIXlt]{as.POSIXlt()}} and cannot be lower than \code{x}}
\item{reference}{reference date(s) (defaults to today), will be coerced with \code{\link[=as.POSIXlt]{as.POSIXlt()}}}
\item{exact}{a logical to indicate whether age calculation should be exact, i.e. with decimals. It divides the number of days of \href{https://en.wikipedia.org/wiki/Year-to-date}{year-to-date} (YTD) of \code{x} by the number of days in the year of \code{reference} (either 365 or 366).}
\item{na.rm}{a logical to indicate whether missing values should be removed}
\item{...}{parameters passed on to \code{\link[=as.POSIXlt]{as.POSIXlt()}}, such as \code{origin}}
}
\value{
An \link{integer} (no decimals) if \code{exact = FALSE}, a \link{double} (with decimals) otherwise
@ -21,6 +23,9 @@ An \link{integer} (no decimals) if \code{exact = FALSE}, a \link{double} (with d
\description{
Calculates age in years based on a reference date, which is the sytem date at default.
}
\details{
Ages below 0 will be returned as \code{NA} with a warning. Ages above 120 will only give a warning.
}
\section{Stable lifecycle}{
\if{html}{\figure{lifecycle_stable.svg}{options: style=margin-bottom:5px} \cr}