mirror of
https://github.com/msberends/AMR.git
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(v1.2.0.9027) move to github
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@ -28,10 +28,10 @@ on:
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branches:
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- master
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name: R-CMD-check
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name: check
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jobs:
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R-CMD-check:
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check:
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runs-on: ${{ matrix.config.os }}
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name: ${{ matrix.config.os }} (${{ matrix.config.r }})
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@ -43,9 +43,9 @@ jobs:
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- {os: windows-latest, r: 'release'}
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- {os: macOS-latest, r: 'release'}
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- {os: ubuntu-16.04, r: 'release', rspm: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest"}
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- {os: windows-latest, r: 'oldrel'}
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- {os: macOS-latest, r: 'oldrel'}
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- {os: ubuntu-16.04, r: 'oldrel', rspm: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest"}
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# - {os: windows-latest, r: 'oldrel'}
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# - {os: macOS-latest, r: 'oldrel'}
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# - {os: ubuntu-16.04, r: 'oldrel', rspm: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest"}
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- {os: windows-latest, r: 'devel'}
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- {os: macOS-latest, r: 'devel'}
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- {os: ubuntu-16.04, r: 'devel', rspm: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest"}
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2
.github/workflows/codecovr.yaml
vendored
2
.github/workflows/codecovr.yaml
vendored
@ -64,5 +64,5 @@ jobs:
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shell: Rscript {0}
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- name: Test coverage
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run: covr::codecov()
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run: covr::codecov(line_exclusions = list("R/atc_online.R", "R/mo_source.R", "R/resistance_predict.R", "R/aa_helper_functions_dplyr.R"))
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shell: Rscript {0}
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2
.github/workflows/lintr.yaml
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2
.github/workflows/lintr.yaml
vendored
@ -62,5 +62,5 @@ jobs:
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shell: Rscript {0}
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- name: Lint
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run: lintr::lint_package()
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run: lint_package(linters = with_defaults(line_length_linter = NULL, trailing_whitespace_linter = NULL, object_name_linter = NULL, cyclocomp_linter = NULL, object_usage_linter = NULL, object_length_linter = object_length_linter(length = 50L)), exclusions = list("R/aa_helper_functions_dplyr.R"))
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shell: Rscript {0}
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