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mirror of https://github.com/msberends/AMR.git synced 2025-07-21 12:13:20 +02:00

(v1.2.0.9027) move to github

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2020-07-08 17:48:57 +02:00
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@ -50,7 +50,7 @@ This package can be used for:
* Applying EUCAST expert rules ([manual](./reference/eucast_rules.html))
* Getting SNOMED codes of a microorganism, or getting properties of a microorganism based on a SNOMED code ([manual](./reference/mo_property.html))
* Getting LOINC codes of an antibiotic, or getting properties of an antibiotic based on a LOINC code ([manual](./reference/ab_property.html))
* Machine reading the EUCAST and CLSI guidelines from 2011-2020 to translate MIC values and disk diffusion diameters to R/SI ([link](https://gitlab.com/msberends/AMR/blob/master/data-raw/rsi_translation.txt))
* Machine reading the EUCAST and CLSI guidelines from 2011-2020 to translate MIC values and disk diffusion diameters to R/SI ([link](https://github.com/msberends/AMR/blob/master/data-raw/rsi_translation.txt))
* Principal component analysis for AMR ([tutorial](./articles/PCA.html))
### Get this package
@ -69,10 +69,10 @@ It will be downloaded and installed automatically. For RStudio, click on the men
#### Latest development version
The latest and unpublished development version can be installed with (**precaution: may be unstable**):
The latest and unpublished development version can be installed from GitHub using:
```r
install.packages("remotes")
remotes::install_gitlab("msberends/AMR")
install.packages("remotes")
remotes::install_github("msberends/AMR")
```
### Get started