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(v0.8.0.9012) mdro improvement

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dr. M.S. (Matthijs) Berends
2019-11-05 11:28:52 +01:00
parent fe606e287b
commit 5345d2759a
12 changed files with 73 additions and 42 deletions
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2
tests/testthat/test-mdro.R
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@ -32,7 +32,7 @@ test_that("mdro works", {
expect_error(mdro(example_isolates, guideline = c("BRMO", "MRGN"), info = TRUE))
expect_error(mdro(example_isolates, col_mo = "invalid", info = TRUE))
outcome <- mdro(example_isolates)
outcome <- suppressWarnings(mdro(example_isolates))
outcome <- eucast_exceptional_phenotypes(example_isolates, info = TRUE)
# check class
expect_equal(outcome %>% class(), c("ordered", "factor"))