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- For functions first_isolate
, EUCAST_rules
the antibiotic column names are case-insensitive
- Functions `first_isolate`, `EUCAST_rules` and `rsi_predict` supports tidyverse-like evaluation of parameters (no need to quote columns them anymore) - Functions `clipboard_import` and `clipboard_export` as helper functions to quickly copy and paste from/to software like Excel and SPSS - Renamed dataset `bactlist` to `microorganisms`
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19
NAMESPACE
19
NAMESPACE
@ -13,25 +13,27 @@ S3method(summary,mic)
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S3method(summary,rsi)
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export(EUCAST_rules)
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export(abname)
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export(anti_join_bactlist)
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export(anti_join_microorganisms)
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export(as.mic)
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export(as.rsi)
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export(atc_property)
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export(clipboard_export)
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export(clipboard_import)
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export(first_isolate)
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export(full_join_bactlist)
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export(full_join_microorganisms)
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export(guess_bactid)
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export(inner_join_bactlist)
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export(inner_join_microorganisms)
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export(interpretive_reading)
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export(is.mic)
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export(is.rsi)
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export(key_antibiotics)
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export(left_join_bactlist)
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export(left_join_microorganisms)
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export(mo_property)
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export(right_join_bactlist)
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export(right_join_microorganisms)
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export(rsi)
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export(rsi_df)
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export(rsi_predict)
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export(semi_join_bactlist)
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export(semi_join_microorganisms)
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exportMethods(as.double.mic)
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exportMethods(as.integer.mic)
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exportMethods(as.numeric.mic)
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@ -48,6 +50,7 @@ importFrom(dplyr,all_vars)
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importFrom(dplyr,any_vars)
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importFrom(dplyr,arrange)
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importFrom(dplyr,arrange_at)
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importFrom(dplyr,as_tibble)
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importFrom(dplyr,between)
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importFrom(dplyr,filter)
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importFrom(dplyr,filter_at)
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@ -73,5 +76,9 @@ importFrom(graphics,text)
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importFrom(reshape2,dcast)
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importFrom(rvest,html_nodes)
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importFrom(rvest,html_table)
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importFrom(utils,object.size)
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importFrom(utils,packageDescription)
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importFrom(utils,read.delim)
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importFrom(utils,write.table)
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importFrom(utils,writeClipboard)
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importFrom(xml2,read_html)
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