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- For functions first_isolate, EUCAST_rules the antibiotic column names are case-insensitive

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- Functions `first_isolate`, `EUCAST_rules` and `rsi_predict` supports tidyverse-like evaluation of parameters (no need to quote columns them anymore)
- Functions `clipboard_import` and `clipboard_export` as helper functions to quickly copy and paste from/to software like Excel and SPSS
- Renamed dataset `bactlist` to `microorganisms`
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dr. M.S. (Matthijs) Berends
2018-03-23 14:46:02 +01:00
parent e1e19af625
commit 53464ff1c8
29 changed files with 693 additions and 373 deletions
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17
NEWS
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## 0.1.2
- Added new function `guess_bactid` to determine the ID of a microorganism based on genus/species
- Renamed `ablist` to `antibiotics`
- Added support for character vector in join functions
- Altered `%like%` to make it case insensitive
- Added new algorithm to determine weighted isolates, can now be `points` or `keyantibiotics, see `?first_isolate`
- Function `first_isolate` supports tidyverse-like evaluation of parameters (no need to quote them anymore)
- Functions `as.rsi` and `as.mic` now add the package name and version as attribute
- NEW: Function `guess_bactid` to determine the ID of a microorganism based on genus/species
- NEW: Functions `clipboard_import` and `clipboard_export` as helper functions to quickly copy and paste from/to software like Excel and SPSS
- NEW: New algorithm to determine weighted isolates, can now be `"points"` or `"keyantibiotics"`, see `?first_isolate`
- EDIT: Renamed dataset `ablist` to `antibiotics`
- EDIT: Renamed dataset `bactlist` to `microorganisms`
- EDIT: Added support for character vector in join functions
- EDIT: Altered `%like%` to make it case insensitive
- EDIT: Functions `first_isolate`, `EUCAST_rules` and `rsi_predict` supports tidyverse-like evaluation of parameters (no need to quote columns them anymore)
- EDIT: For functions `first_isolate`, `EUCAST_rules` the antibiotic column names are case-insensitive
- EDIT: Functions `as.rsi` and `as.mic` now add the package name and version as attribute
## 0.1.1
- `EUCAST_rules` applies for amoxicillin even if ampicillin is missing