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- For functions first_isolate, EUCAST_rules the antibiotic column names are case-insensitive

- Functions `first_isolate`, `EUCAST_rules` and `rsi_predict` supports tidyverse-like evaluation of parameters (no need to quote columns them anymore)
- Functions `clipboard_import` and `clipboard_export` as helper functions to quickly copy and paste from/to software like Excel and SPSS
- Renamed dataset `bactlist` to `microorganisms`
This commit is contained in:
2018-03-23 14:46:02 +01:00
parent e1e19af625
commit 53464ff1c8
29 changed files with 693 additions and 373 deletions

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@@ -4,10 +4,10 @@
\alias{mo_property}
\title{Poperties of a microorganism}
\usage{
mo_property(bactcode, property = "fullname")
mo_property(bactid, property = "fullname")
}
\arguments{
\item{bactcode}{ID of a microorganisme, like \code{"STAAUR} and \code{"ESCCOL}}
\item{bactid}{ID of a microorganisme, like \code{"STAAUR} and \code{"ESCCOL}}
\item{property}{One of the values \code{bactid}, \code{bactsys}, \code{family}, \code{genus}, \code{species}, \code{subspecies}, \code{fullname}, \code{type}, \code{gramstain}, \code{aerobic}}
}
@@ -15,5 +15,5 @@ mo_property(bactcode, property = "fullname")
Poperties of a microorganism
}
\seealso{
\code{\link{bactlist}}
\code{\link{microorganisms}}
}