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dr. M.S. (Matthijs) Berends 2023-01-05 15:41:07 +01:00
parent 51c0f0814e
commit 5361c0b2a0
4 changed files with 16 additions and 29 deletions
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17
.github/workflows/check-old.yaml vendored
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@ -29,12 +29,8 @@
on: on:
push: push:
# run after a git push on any branch in this repo # only run after a git push on any branch in this repo
branches: '**' branches: '**'
schedule:
# run a schedule everyday at 1 AM.
# this is to check that all dependencies are still available (see R/zzz.R)
- cron: '0 1 * * *'
name: check-old name: check-old
@ -51,12 +47,11 @@ jobs:
matrix: matrix:
config: config:
# Test all old versions of R >= 3.0, we support them all! # Test all old versions of R >= 3.0, we support them all!
# For recent R versions, see check-recent.yaml (r-lib supports the latest 5 major versions) # For recent R versions, see check-recent.yaml (r-lib supports the latest 5 major R versions)
- {os: ubuntu-22.04, r: '3.4', allowfail: false, rspm: "https://packagemanager.rstudio.com/cran/__linux__/jammy/latest"} - {os: ubuntu-22.04, r: '3.3', allowfail: false, rspm: "https://packagemanager.rstudio.com/cran/__linux__/jammy/latest"}
- {os: ubuntu-22.04, r: '3.3', allowfail: false, rspm: "https://packagemanager.rstudio.com/cran/__linux__/jammy/latest"} - {os: ubuntu-22.04, r: '3.2', allowfail: false, rspm: "https://packagemanager.rstudio.com/cran/__linux__/jammy/latest"}
- {os: ubuntu-22.04, r: '3.2', allowfail: false, rspm: "https://packagemanager.rstudio.com/cran/__linux__/jammy/latest"} - {os: ubuntu-22.04, r: '3.1', allowfail: false, rspm: "https://packagemanager.rstudio.com/cran/__linux__/jammy/latest"}
- {os: ubuntu-22.04, r: '3.1', allowfail: false, rspm: "https://packagemanager.rstudio.com/cran/__linux__/jammy/latest"} - {os: ubuntu-22.04, r: '3.0', allowfail: false, rspm: "https://packagemanager.rstudio.com/cran/__linux__/jammy/latest"}
- {os: ubuntu-22.04, r: '3.0', allowfail: false, rspm: "https://packagemanager.rstudio.com/cran/__linux__/jammy/latest"}
env: env:
R_REMOTES_NO_ERRORS_FROM_WARNINGS: true R_REMOTES_NO_ERRORS_FROM_WARNINGS: true

24
.github/workflows/check-recent.yaml vendored
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@ -34,7 +34,7 @@ on:
push: push:
branches: '**' branches: '**'
schedule: schedule:
# run a schedule everyday at 1 AM. # also run a schedule everyday at 1 AM.
# this is to check that all dependencies are still available (see R/zzz.R) # this is to check that all dependencies are still available (see R/zzz.R)
- cron: '0 1 * * *' - cron: '0 1 * * *'
@ -56,26 +56,18 @@ jobs:
- {os: macOS-latest, r: 'devel', allowfail: false} - {os: macOS-latest, r: 'devel', allowfail: false}
- {os: windows-latest, r: 'devel', allowfail: false} - {os: windows-latest, r: 'devel', allowfail: false}
- {os: ubuntu-latest, r: 'devel', allowfail: false} - {os: ubuntu-latest, r: 'devel', allowfail: false}
# current 'release' version: # current 'release' version:
- {os: macOS-latest, r: '4.2', allowfail: false} - {os: macOS-latest, r: '4.2', allowfail: false}
- {os: windows-latest, r: '4.2', allowfail: false} - {os: windows-latest, r: '4.2', allowfail: false}
- {os: ubuntu-latest, r: '4.2', allowfail: false} - {os: ubuntu-latest, r: '4.2', allowfail: false}
# older versions:
- {os: macOS-latest, r: '4.1', allowfail: false}
- {os: windows-latest, r: '4.1', allowfail: false}
- {os: ubuntu-latest, r: '4.1', allowfail: false}
- {os: macOS-latest, r: '4.0', allowfail: false} # older versions (see also check-old.yaml for even older versions):
- {os: windows-latest, r: '4.0', allowfail: false} - {os: ubuntu-latest, r: '4.1', allowfail: false}
- {os: ubuntu-latest, r: '4.0', allowfail: false} - {os: ubuntu-latest, r: '4.0', allowfail: false}
- {os: ubuntu-latest, r: '3.6', allowfail: false}
- {os: macOS-latest, r: '3.6', allowfail: false} - {os: ubuntu-latest, r: '3.5', allowfail: false}
- {os: windows-latest, r: '3.6', allowfail: false} - {os: ubuntu-latest, r: '3.4', allowfail: false} # when a new R releases, this one has to move to check-old.yaml
- {os: ubuntu-latest, r: '3.6', allowfail: false}
- {os: macOS-latest, r: '3.5', allowfail: false}
- {os: windows-latest, r: '3.5', allowfail: false}
- {os: ubuntu-latest, r: '3.5', allowfail: false}
env: env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}

2
DESCRIPTION
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@ -1,5 +1,5 @@
Package: AMR Package: AMR
Version: 1.8.2.9079 Version: 1.8.2.9080
Date: 2023-01-05 Date: 2023-01-05
Title: Antimicrobial Resistance Data Analysis Title: Antimicrobial Resistance Data Analysis
Description: Functions to simplify and standardise antimicrobial resistance (AMR) Description: Functions to simplify and standardise antimicrobial resistance (AMR)

2
NEWS.md
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@ -1,4 +1,4 @@
# AMR 1.8.2.9079 # AMR 1.8.2.9080
*(this beta version will eventually become v2.0! We're happy to reach a new major milestone soon!)* *(this beta version will eventually become v2.0! We're happy to reach a new major milestone soon!)*