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(v1.7.1.9067) Support for Swedish and Russian

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dr. M.S. (Matthijs) Berends
2021-12-12 09:42:03 +01:00
parent 5b5f70a103
commit 56f1ce328a
81 changed files with 1588 additions and 530 deletions
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60
man/mo_property.Rd
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@@ -32,68 +32,68 @@
\alias{mo_url}
\title{Get Properties of a Microorganism}
\usage{
mo_name(x, language = get_locale(), ...)
mo_name(x, language = get_AMR_locale(), ...)
mo_fullname(x, language = get_locale(), ...)
mo_fullname(x, language = get_AMR_locale(), ...)
mo_shortname(x, language = get_locale(), ...)
mo_shortname(x, language = get_AMR_locale(), ...)
mo_subspecies(x, language = get_locale(), ...)
mo_subspecies(x, language = get_AMR_locale(), ...)
mo_species(x, language = get_locale(), ...)
mo_species(x, language = get_AMR_locale(), ...)
mo_genus(x, language = get_locale(), ...)
mo_genus(x, language = get_AMR_locale(), ...)
mo_family(x, language = get_locale(), ...)
mo_family(x, language = get_AMR_locale(), ...)
mo_order(x, language = get_locale(), ...)
mo_order(x, language = get_AMR_locale(), ...)
mo_class(x, language = get_locale(), ...)
mo_class(x, language = get_AMR_locale(), ...)
mo_phylum(x, language = get_locale(), ...)
mo_phylum(x, language = get_AMR_locale(), ...)
mo_kingdom(x, language = get_locale(), ...)
mo_kingdom(x, language = get_AMR_locale(), ...)
mo_domain(x, language = get_locale(), ...)
mo_domain(x, language = get_AMR_locale(), ...)
mo_type(x, language = get_locale(), ...)
mo_type(x, language = get_AMR_locale(), ...)
mo_gramstain(x, language = get_locale(), ...)
mo_gramstain(x, language = get_AMR_locale(), ...)
mo_is_gram_negative(x, language = get_locale(), ...)
mo_is_gram_negative(x, language = get_AMR_locale(), ...)
mo_is_gram_positive(x, language = get_locale(), ...)
mo_is_gram_positive(x, language = get_AMR_locale(), ...)
mo_is_yeast(x, language = get_locale(), ...)
mo_is_yeast(x, language = get_AMR_locale(), ...)
mo_is_intrinsic_resistant(x, ab, language = get_locale(), ...)
mo_is_intrinsic_resistant(x, ab, language = get_AMR_locale(), ...)
mo_snomed(x, language = get_locale(), ...)
mo_snomed(x, language = get_AMR_locale(), ...)
mo_ref(x, language = get_locale(), ...)
mo_ref(x, language = get_AMR_locale(), ...)
mo_authors(x, language = get_locale(), ...)
mo_authors(x, language = get_AMR_locale(), ...)
mo_year(x, language = get_locale(), ...)
mo_year(x, language = get_AMR_locale(), ...)
mo_lpsn(x, language = get_locale(), ...)
mo_lpsn(x, language = get_AMR_locale(), ...)
mo_rank(x, language = get_locale(), ...)
mo_rank(x, language = get_AMR_locale(), ...)
mo_taxonomy(x, language = get_locale(), ...)
mo_taxonomy(x, language = get_AMR_locale(), ...)
mo_synonyms(x, language = get_locale(), ...)
mo_synonyms(x, language = get_AMR_locale(), ...)
mo_info(x, language = get_locale(), ...)
mo_info(x, language = get_AMR_locale(), ...)
mo_url(x, open = FALSE, language = get_locale(), ...)
mo_url(x, open = FALSE, language = get_AMR_locale(), ...)
mo_property(x, property = "fullname", language = get_locale(), ...)
mo_property(x, property = "fullname", language = get_AMR_locale(), ...)
}
\arguments{
\item{x}{any \link{character} (vector) that can be coerced to a valid microorganism code with \code{\link[=as.mo]{as.mo()}}. Can be left blank for auto-guessing the column containing microorganism codes if used in a data set, see \emph{Examples}.}
\item{language}{language of the returned text, defaults to system language (see \code{\link[=get_locale]{get_locale()}}) and can be overwritten by setting the option \code{AMR_locale}, e.g. \code{options(AMR_locale = "de")}, see \link{translate}. Also used to translate text like "no growth". Use \code{language = NULL} or \code{language = ""} to prevent translation.}
\item{language}{language of the returned text, defaults to system language (see \code{\link[=get_AMR_locale]{get_AMR_locale()}}) and can be overwritten by setting the option \code{AMR_locale}, e.g. \code{options(AMR_locale = "de")}, see \link{translate}. Also used to translate text like "no growth". Use \code{language = NULL} or \code{language = ""} to prevent translation.}
\item{...}{other arguments passed on to \code{\link[=as.mo]{as.mo()}}, such as 'allow_uncertain' and 'ignore_pattern'}