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replaced bactid by mo

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dr. M.S. (Matthijs) Berends
2018-08-31 13:36:19 +02:00
parent 98ff131680
commit 5965d3c794
41 changed files with 786 additions and 411 deletions
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6
tests/testthat/test-join_microorganisms.R
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@ -25,11 +25,11 @@ test_that("joins work", {
expect_equal(nrow(inner_join_microorganisms("ESCCOL")), 1)
expect_equal(nrow(inner_join_microorganisms("ESCCOL", by = c("bactid" = "bactid"))), 1)
expect_warning(inner_join_microorganisms("Escherichia", by = c("bactid" = "genus")))
expect_equal(nrow(inner_join_microorganisms("ESCCOL", by = c("mo" = "mo"))), 1)
expect_warning(inner_join_microorganisms("Escherichia", by = c("mo" = "genus")))
expect_equal(nrow(left_join_microorganisms("ESCCOL")), 1)
expect_warning(left_join_microorganisms("Escherichia", by = c("bactid" = "genus")))
expect_warning(left_join_microorganisms("Escherichia", by = c("mo" = "genus")))
expect_equal(nrow(semi_join_microorganisms("ESCCOL")), 1)
expect_equal(nrow(anti_join_microorganisms("ESCCOL")), 0)