From 59c39dc5d14cc0a69687e9641debda72abfc1a18 Mon Sep 17 00:00:00 2001 From: github-actions <41898282+github-actions[bot]@users.noreply.github.com> Date: Mon, 23 Jan 2023 19:14:37 +0000 Subject: [PATCH] Built site for AMR: 1.8.2.9099@eef0006 --- 404.html | 29 +- LICENSE-text.html | 29 +- articles/AMR.html | 557 +++++++++--------- .../AMR_files/figure-html/disk_plots-1.png | Bin 39107 -> 38754 bytes .../figure-html/disk_plots_mo_ab-1.png | Bin 55128 -> 56475 bytes .../AMR_files/figure-html/mic_plots-1.png | Bin 28168 -> 28324 bytes .../AMR_files/figure-html/mic_plots-2.png | Bin 39232 -> 37611 bytes .../figure-html/mic_plots_mo_ab-1.png | Bin 36941 -> 38328 bytes .../figure-html/mic_plots_mo_ab-2.png | Bin 50186 -> 51436 bytes articles/AMR_files/figure-html/plot 1-1.png | Bin 41953 -> 41824 bytes articles/AMR_files/figure-html/plot 3-1.png | Bin 28407 -> 28505 bytes articles/AMR_files/figure-html/plot 4-1.png | Bin 78232 -> 78282 bytes articles/AMR_files/figure-html/plot 5-1.png | Bin 49896 -> 49897 bytes articles/EUCAST.html | 29 +- articles/MDR.html | 87 +-- articles/PCA.html | 29 +- articles/SPSS.html | 29 +- articles/WHONET.html | 29 +- articles/datasets.html | 29 +- articles/index.html | 29 +- articles/resistance_predict.html | 29 +- articles/welcome_to_AMR.html | 29 +- authors.html | 29 +- index.html | 29 +- news/index.html | 51 +- pkgdown.yml | 2 +- reference/AMR-deprecated.html | 29 +- reference/AMR-options.html | 71 ++- reference/AMR.html | 29 +- reference/Rplot005.png | Bin 12930 -> 13003 bytes reference/Rplot006.png | Bin 12462 -> 12528 bytes reference/Rplot007.png | Bin 12686 -> 12678 bytes reference/Rplot008.png | Bin 18894 -> 19061 bytes reference/Rplot009.png | Bin 8531 -> 8444 bytes reference/WHOCC.html | 29 +- reference/WHONET.html | 29 +- reference/ab_from_text.html | 29 +- reference/ab_property.html | 31 +- reference/add_custom_antimicrobials.html | 40 +- reference/add_custom_microorganisms.html | 31 +- reference/age.html | 49 +- reference/age_groups.html | 29 +- reference/antibiotic_class_selectors.html | 29 +- reference/antibiotics.html | 29 +- reference/as.ab.html | 29 +- reference/as.av.html | 29 +- reference/as.disk.html | 29 +- reference/as.mic.html | 29 +- reference/as.mo.html | 33 +- reference/as.sir.html | 60 +- reference/atc_online.html | 29 +- reference/av_from_text.html | 29 +- reference/av_property.html | 31 +- reference/availability.html | 29 +- reference/bug_drug_combinations.html | 31 +- reference/clinical_breakpoints.html | 29 +- reference/count.html | 31 +- reference/custom_eucast_rules.html | 29 +- reference/dosage.html | 29 +- reference/eucast_rules.html | 33 +- reference/example_isolates.html | 29 +- reference/example_isolates_unclean.html | 29 +- reference/first_isolate.html | 29 +- reference/g.test.html | 29 +- reference/get_episode.html | 180 +++--- reference/ggplot_pca.html | 29 +- reference/ggplot_sir.html | 31 +- reference/guess_ab_col.html | 29 +- reference/index.html | 45 +- reference/intrinsic_resistant.html | 29 +- reference/italicise_taxonomy.html | 29 +- reference/join.html | 29 +- reference/key_antimicrobials.html | 29 +- reference/kurtosis.html | 33 +- reference/like.html | 29 +- reference/mdro.html | 29 +- reference/mean_amr_distance.html | 118 ++-- reference/microorganisms.codes.html | 29 +- reference/microorganisms.html | 29 +- reference/mo_matching_score.html | 29 +- reference/mo_property.html | 31 +- reference/mo_source.html | 31 +- reference/pca.html | 29 +- reference/plot-1.png | Bin 25832 -> 26292 bytes reference/plot-2.png | Bin 26417 -> 26402 bytes reference/plot-3.png | Bin 28235 -> 27461 bytes reference/plot-4.png | Bin 37733 -> 38130 bytes reference/plot-5.png | Bin 38005 -> 38019 bytes reference/plot-6.png | Bin 36805 -> 36797 bytes reference/plot-7.png | Bin 36934 -> 36814 bytes reference/plot-8.png | Bin 56841 -> 56739 bytes reference/plot-9.png | Bin 26275 -> 26089 bytes reference/plot.html | 31 +- reference/proportion.html | 31 +- reference/random.html | 60 +- reference/resistance_predict.html | 29 +- reference/skewness.html | 31 +- reference/translate.html | 39 +- search.json | 2 +- 99 files changed, 1788 insertions(+), 1376 deletions(-) diff --git a/404.html b/404.html index eb7347f00..4c02e0c3e 100644 --- a/404.html +++ b/404.html @@ -36,7 +36,7 @@ AMR (for R) - 1.8.2.9098 + 1.8.2.9099