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keyab automatic

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dr. M.S. (Matthijs) Berends
2018-12-10 15:14:29 +01:00
parent 9478ab71be
commit 5ab7eb07bc
4 changed files with 37 additions and 10 deletions
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NEWS.md
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@@ -12,6 +12,9 @@
* There will be looked for uncertain results at default - these results will be returned with an informative warning
* Manual now contains more info about the algorithms
* Progress bar will be shown when it takes more than 3 seconds to get results
* Function `first_isolate`:
* Will now use a column named like "patid" for the patient ID (parameter `col_patientid`), when this parameter was left blank
* Will now use a column named like "key(...)ab" or "key(...)antibiotics" for the key antibiotics (parameter `col_keyantibiotics`), when this parameter was left blank
* Function `first_isolate` will now use a column named like "patid" for the patient ID, when this parameter was left blank
* Reduce false positives for `is.rsi.eligible`
* Summaries of class `mo` will now return the top 3 and the unique count, e.g. using `summary(mo)`