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(v1.7.1.9011) subsetting taxonomy fix

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dr. M.S. (Matthijs) Berends
2021-07-04 15:26:50 +02:00
parent 3bd50710e8
commit 5b5741f681
20 changed files with 94 additions and 86 deletions
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30
docs/index.html
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@ -42,7 +42,7 @@
</button>
<span class="navbar-brand">
<a class="navbar-link" href="index.html">AMR (for R)</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.7.1.9010</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.7.1.9011</span>
</span>
</div>
@ -227,38 +227,38 @@
<table class="table">
<thead><tr class="header">
<th align="left">bacteria</th>
<th align="center">AMK</th>
<th align="center">GEN</th>
<th align="center">KAN</th>
<th align="center">TOB</th>
<th align="center">AMK</th>
<th align="center">KAN</th>
<th align="center">IPM</th>
<th align="center">MEM</th>
</tr></thead>
<tbody>
<tr class="odd">
<td align="left"><em>Pseudomonas aeruginosa</em></td>
<td align="center"></td>
<td align="center">I</td>
<td align="center">R</td>
<td align="center">S</td>
<td align="center"></td>
<td align="center">R</td>
<td align="center">S</td>
<td align="center"></td>
</tr>
<tr class="even">
<td align="left"><em>Pseudomonas aeruginosa</em></td>
<td align="center"></td>
<td align="center">I</td>
<td align="center">R</td>
<td align="center">S</td>
<td align="center"></td>
<td align="center">R</td>
<td align="center">S</td>
<td align="center"></td>
</tr>
<tr class="odd">
<td align="left"><em>Pseudomonas aeruginosa</em></td>
<td align="center"></td>
<td align="center">I</td>
<td align="center">R</td>
<td align="center">S</td>
<td align="center"></td>
<td align="center">R</td>
<td align="center">S</td>
<td align="center"></td>
</tr>
@ -266,8 +266,8 @@
<td align="left"><em>Pseudomonas aeruginosa</em></td>
<td align="center">S</td>
<td align="center">S</td>
<td align="center">R</td>
<td align="center">S</td>
<td align="center">R</td>
<td align="center"></td>
<td align="center">S</td>
</tr>
@ -275,8 +275,8 @@
<td align="left"><em>Pseudomonas aeruginosa</em></td>
<td align="center">S</td>
<td align="center">S</td>
<td align="center">R</td>
<td align="center">S</td>
<td align="center">R</td>
<td align="center">S</td>
<td align="center">S</td>
</tr>
@ -284,8 +284,8 @@
<td align="left"><em>Pseudomonas aeruginosa</em></td>
<td align="center">S</td>
<td align="center">S</td>
<td align="center">R</td>
<td align="center">S</td>
<td align="center">R</td>
<td align="center">S</td>
<td align="center">S</td>
</tr>
@ -302,8 +302,8 @@
<td align="left"><em>Pseudomonas aeruginosa</em></td>
<td align="center">S</td>
<td align="center">S</td>
<td align="center">R</td>
<td align="center">S</td>
<td align="center">R</td>
<td align="center"></td>
<td align="center">S</td>
</tr>
@ -311,8 +311,8 @@
<td align="left"><em>Pseudomonas aeruginosa</em></td>
<td align="center">S</td>
<td align="center">S</td>
<td align="center">R</td>
<td align="center">S</td>
<td align="center">R</td>
<td align="center"></td>
<td align="center">S</td>
</tr>
@ -320,8 +320,8 @@
<td align="left"><em>Pseudomonas aeruginosa</em></td>
<td align="center">S</td>
<td align="center">S</td>
<td align="center">R</td>
<td align="center">S</td>
<td align="center">R</td>
<td align="center">S</td>
<td align="center">S</td>
</tr>