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count_all and some fixes

This commit is contained in:
2018-10-12 16:35:18 +02:00
parent e7d937d36e
commit 5b5b95a47b
22 changed files with 232 additions and 246 deletions

View File

@@ -68,11 +68,11 @@ test_that("portions works", {
expect_error(portion_S("test", as_percent = "test"))
# check too low amount of isolates
expect_identical(portion_R(septic_patients$amox, minimum = nrow(septic_patients) + 1),
expect_identical(suppressWarnings(portion_R(septic_patients$amox, minimum = nrow(septic_patients) + 1)),
NA)
expect_identical(portion_I(septic_patients$amox, minimum = nrow(septic_patients) + 1),
expect_identical(suppressWarnings(portion_I(septic_patients$amox, minimum = nrow(septic_patients) + 1)),
NA)
expect_identical(portion_S(septic_patients$amox, minimum = nrow(septic_patients) + 1),
expect_identical(suppressWarnings(portion_S(septic_patients$amox, minimum = nrow(septic_patients) + 1)),
NA)
# warning for speed loss