mirror of
				https://github.com/msberends/AMR.git
				synced 2025-10-31 07:28:17 +01:00 
			
		
		
		
	(v3.0.0.9030) fix NEWS
This commit is contained in:
		
							
								
								
									
										10
									
								
								.github/prehooks/pre-commit
									
									
									
									
										vendored
									
									
								
							
							
						
						
									
										10
									
								
								.github/prehooks/pre-commit
									
									
									
									
										vendored
									
									
								
							| @@ -48,7 +48,6 @@ echo "Running prehook..." | |||||||
| if command -v Rscript > /dev/null; then | if command -v Rscript > /dev/null; then | ||||||
|   if [ "$(Rscript -e 'cat(all(c('"'pkgload'"', '"'devtools'"', '"'dplyr'"') %in% rownames(installed.packages())))')" = "TRUE" ]; then |   if [ "$(Rscript -e 'cat(all(c('"'pkgload'"', '"'devtools'"', '"'dplyr'"') %in% rownames(installed.packages())))')" = "TRUE" ]; then | ||||||
|     Rscript -e "source('data-raw/_pre_commit_checks.R')" |     Rscript -e "source('data-raw/_pre_commit_checks.R')" | ||||||
|     currentpkg=$(Rscript -e "cat(pkgload::pkg_name())") |  | ||||||
|     echo "- Adding changed files in ./data-raw and ./man to this commit" |     echo "- Adding changed files in ./data-raw and ./man to this commit" | ||||||
|     git add data-raw/* |     git add data-raw/* | ||||||
|     git add data/* |     git add data/* | ||||||
| @@ -57,11 +56,9 @@ if command -v Rscript > /dev/null; then | |||||||
|     git add NAMESPACE |     git add NAMESPACE | ||||||
|   else |   else | ||||||
|     echo "- R package 'pkgload', 'devtools', or 'dplyr' not installed!" |     echo "- R package 'pkgload', 'devtools', or 'dplyr' not installed!" | ||||||
|     currentpkg="your" |  | ||||||
|   fi |   fi | ||||||
| else | else | ||||||
|   echo "- R is not available on your system!" |   echo "- R is not available on your system!" | ||||||
|   currentpkg="your" |  | ||||||
| fi | fi | ||||||
| echo "" | echo "" | ||||||
|  |  | ||||||
| @@ -92,7 +89,7 @@ else | |||||||
|    |    | ||||||
|   # Combine tag and commit number |   # Combine tag and commit number | ||||||
|   currentversion="$currenttag.$((currentcommit + 9001))" |   currentversion="$currenttag.$((currentcommit + 9001))" | ||||||
|   echo "- ${currentpkg} pkg version set to ${currentversion}" |   echo "- AMR pkg version set to ${currentversion}" | ||||||
|    |    | ||||||
|   # Update version number and date in DESCRIPTION |   # Update version number and date in DESCRIPTION | ||||||
|   sed -i -- "s/^Version: .*/Version: ${currentversion}/" DESCRIPTION |   sed -i -- "s/^Version: .*/Version: ${currentversion}/" DESCRIPTION | ||||||
| @@ -103,10 +100,7 @@ else | |||||||
|    |    | ||||||
|   # Update version number in NEWS.md |   # Update version number in NEWS.md | ||||||
|   if [ -e "NEWS.md" ]; then |   if [ -e "NEWS.md" ]; then | ||||||
|     if [ "$currentpkg" = "your" ]; then |     sed -i -- "1s/.*/# AMR ${currentversion}/" NEWS.md | ||||||
|       currentpkg="" |  | ||||||
|     fi |  | ||||||
|     sed -i -- "1s/.*/# ${currentpkg} ${currentversion}/" NEWS.md |  | ||||||
|     echo "- Updated version number in ./NEWS.md" |     echo "- Updated version number in ./NEWS.md" | ||||||
|     rm -f NEWS.md-- |     rm -f NEWS.md-- | ||||||
|     git add NEWS.md |     git add NEWS.md | ||||||
|   | |||||||
							
								
								
									
										1
									
								
								.gitignore
									
									
									
									
										vendored
									
									
								
							
							
						
						
									
										1
									
								
								.gitignore
									
									
									
									
										vendored
									
									
								
							| @@ -1,5 +1,6 @@ | |||||||
| Meta | Meta | ||||||
| doc | doc | ||||||
|  | docs | ||||||
| .Renviron | .Renviron | ||||||
| .Rproj.user | .Rproj.user | ||||||
| .Rhistory | .Rhistory | ||||||
|   | |||||||
| @@ -1,6 +1,6 @@ | |||||||
| Package: AMR | Package: AMR | ||||||
| Version: 3.0.0.9029 | Version: 3.0.0.9030 | ||||||
| Date: 2025-09-10 | Date: 2025-09-11 | ||||||
| Title: Antimicrobial Resistance Data Analysis | Title: Antimicrobial Resistance Data Analysis | ||||||
| Description: Functions to simplify and standardise antimicrobial resistance (AMR) | Description: Functions to simplify and standardise antimicrobial resistance (AMR) | ||||||
|   data analysis and to work with microbial and antimicrobial properties by |   data analysis and to work with microbial and antimicrobial properties by | ||||||
|   | |||||||
		Reference in New Issue
	
	Block a user