diff --git a/.github/workflows/check-current-testthat.yaml b/.github/workflows/check-current-testthat.yaml
index c36368939..8af0efd8d 100644
--- a/.github/workflows/check-current-testthat.yaml
+++ b/.github/workflows/check-current-testthat.yaml
@@ -98,10 +98,5 @@ jobs:
       - name: Show files
         if: matrix.config.os == 'ubuntu-latest'
         run: |
-          ls /home/runner/work/AMR/AMR/
-          ls /home/runner/work/AMR/AMR/check
-          ls /home/runner/work/AMR/AMR/check/**
-          ls /home/runner/work/AMR/AMR/check/**/tests*
           ls /home/runner/work/AMR/AMR/check/**/tests*/testthat/
           ls /home/runner/work/AMR/AMR/check/**/tests*/testthat/_snaps
-
diff --git a/.github/workflows/publish-to-pypi.yml b/.github/workflows/publish-to-pypi.yml
index 161e42c7f..27bf93a58 100644
--- a/.github/workflows/publish-to-pypi.yml
+++ b/.github/workflows/publish-to-pypi.yml
@@ -85,10 +85,9 @@ jobs:
           
           # Delete all existing files from the working tree (safely)
           git rm -rf . || true
+          mv .git PythonPackage/AMR/
           find . -mindepth 1 ! -name 'PythonPackage' -exec rm -rf {} +
       
-          # Copy over only PythonPackage/AMR contents from main
-          git checkout main -- PythonPackage/AMR
           mv PythonPackage/AMR/* .
           rm -rf PythonPackage
           
diff --git a/DESCRIPTION b/DESCRIPTION
index 16e494b14..dc9e30aed 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -1,5 +1,5 @@
 Package: AMR
-Version: 2.1.1.9208
+Version: 2.1.1.9209
 Date: 2025-03-15
 Title: Antimicrobial Resistance Data Analysis
 Description: Functions to simplify and standardise antimicrobial resistance (AMR)
diff --git a/NEWS.md b/NEWS.md
index fefe2924e..cd1eea997 100644
--- a/NEWS.md
+++ b/NEWS.md
@@ -1,4 +1,4 @@
-# AMR 2.1.1.9208
+# AMR 2.1.1.9209
 
 *(this beta version will eventually become v3.0. We're happy to reach a new major milestone soon, which will be all about the new One Health support! Install this beta using [the instructions here](https://msberends.github.io/AMR/#latest-development-version).)*
 
diff --git a/data-raw/gpt_training_text_v2.1.1.9208.txt b/data-raw/gpt_training_text_v2.1.1.9209.txt
similarity index 99%
rename from data-raw/gpt_training_text_v2.1.1.9208.txt
rename to data-raw/gpt_training_text_v2.1.1.9209.txt
index 1df773932..06f0f4307 100644
--- a/data-raw/gpt_training_text_v2.1.1.9208.txt
+++ b/data-raw/gpt_training_text_v2.1.1.9209.txt
@@ -1,6 +1,6 @@
 This knowledge base contains all context you must know about the AMR package for R. You are a GPT trained to be an assistant for the AMR package in R. You are an incredible R specialist, especially trained in this package and in the tidyverse.
 
-First and foremost, you are trained on version 2.1.1.9208. Remember this whenever someone asks which AMR package version you’re at.
+First and foremost, you are trained on version 2.1.1.9209. Remember this whenever someone asks which AMR package version you’re at.
 
 Below are the contents of the NAMESPACE file, the index.md file, and all the man/*.Rd files (documentation) in the package. Every file content is split using 100 hypens.
 ----------------------------------------------------------------------------------------------------