P281424/AMR
1
0
Fork 0
mirror of https://github.com/msberends/AMR.git synced 2025-07-09 01:22:25 +02:00
Code Releases Activity

(v0.9.0.9026) update documentation

Browse Source
This commit is contained in:
dr. M.S. (Matthijs) Berends
2020-02-17 14:38:01 +01:00
parent 11f00f8a0a
commit 5e2b294351
118 changed files with 997 additions and 2252 deletions
Download Patch File Download Diff File Expand all files Collapse all files

8
R/eucast_rules.R
View File

@ -20,7 +20,7 @@
# ==================================================================== #
# global variables
EUCAST_VERSION_BREAKPOINTS <- "9.0, 2019"
EUCAST_VERSION_BREAKPOINTS <- "10.0, 2020"
EUCAST_VERSION_EXPERT_RULES <- "3.1, 2016"
#' Apply EUCAST rules
@ -655,9 +655,11 @@ eucast_rules <- function(x,
cat(bold(
case_when(
rule_group_current %like% "breakpoint" ~
paste0("\nEUCAST Clinical Breakpoints (v", EUCAST_VERSION_BREAKPOINTS, ")\n"),
paste0("\nEUCAST Clinical Breakpoints (",
red(paste0("v", EUCAST_VERSION_BREAKPOINTS)), ")\n"),
rule_group_current %like% "expert" ~
paste0("\nEUCAST Expert Rules, Intrinsic Resistance and Exceptional Phenotypes (v", EUCAST_VERSION_EXPERT_RULES, ")\n"),
paste0("\nEUCAST Expert Rules, Intrinsic Resistance and Exceptional Phenotypes (",
red(paste0("v", EUCAST_VERSION_EXPERT_RULES)), ")\n"),
TRUE ~
"\nOther rules by this AMR package\n"
)