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(v0.9.0.9026) update documentation

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dr. M.S. (Matthijs) Berends
2020-02-17 14:38:01 +01:00
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man/AMR.Rd
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@ -23,12 +23,14 @@ This package can be used for:
\item Getting properties for any microorganism (like Gram stain, species, genus or family)
\item Getting properties for any antibiotic (like name, EARS-Net code, ATC code, PubChem code, defined daily dose or trade name)
\item Plotting antimicrobial resistance
\item Applying EUCAST expert rules
\item Getting SNOMED codes of a microorganism, or get its name associated with a SNOMED code
\item Getting LOINC codes of an antibiotic, or get its name associated with a LOINC code
\item Machine reading the EUCAST and CLSI guidelines from 2011-2020 to translate MIC values and disk diffusion diameters to R/SI
}
}
\section{Read more on our website!}{
On our website \url{https://msberends.gitlab.io/AMR} you can find \href{https://msberends.gitlab.io/AMR/articles/AMR.html}{a tutorial} about how to conduct AMR analysis, the \href{https://msberends.gitlab.io/AMR/reference}{complete documentation of all functions} (which reads a lot easier than here in R) and \href{https://msberends.gitlab.io/AMR/articles/WHONET.html}{an example analysis using WHONET data}.
On our website \url{https://msberends.gitlab.io/AMR} you can find \href{https://msberends.gitlab.io/AMR/articles/AMR.html}{a comprehensive tutorial} about how to conduct AMR analysis, the \href{https://msberends.gitlab.io/AMR/reference}{complete documentation of all functions} (which reads a lot easier than here in R) and \href{https://msberends.gitlab.io/AMR/articles/WHONET.html}{an example analysis using WHONET data}.
}
\section{Contact us}{
@ -36,7 +38,7 @@ On our website \url{https://msberends.gitlab.io/AMR} you can find \href{https://
For suggestions, comments or questions, please contact us at:
Matthijs S. Berends \cr
m.s.berends at umcg dot nl \cr
m.s.berends [at] umcg [dot] nl \cr
Department of Medical Microbiology, University of Groningen \cr
University Medical Center Groningen \cr
Post Office Box 30001 \cr