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(v2.1.1.9232) is.mic() iteration, documentation cleanup

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dr. M.S. (Matthijs) Berends
2025-03-31 10:51:31 +02:00
parent 5f5b77bfaf
commit 63099cd81e
93 changed files with 1001 additions and 990 deletions
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14
man/av_from_text.Rd
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@ -9,19 +9,19 @@ av_from_text(text, type = c("drug", "dose", "administration"),
info = interactive(), ...)
}
\arguments{
\item{text}{text to analyse}
\item{text}{Text to analyse}
\item{type}{type of property to search for, either \code{"drug"}, \code{"dose"} or \code{"administration"}, see \emph{Examples}}
\item{type}{Type of property to search for, either \code{"drug"}, \code{"dose"} or \code{"administration"}, see \emph{Examples}}
\item{collapse}{a \link{character} to pass on to \code{paste(, collapse = ...)} to only return one \link{character} per element of \code{text}, see \emph{Examples}}
\item{collapse}{A \link{character} to pass on to \code{paste(, collapse = ...)} to only return one \link{character} per element of \code{text}, see \emph{Examples}}
\item{translate_av}{if \code{type = "drug"}: a column name of the \link{antivirals} data set to translate the antibiotic abbreviations to, using \code{\link[=av_property]{av_property()}}. The default is \code{FALSE}. Using \code{TRUE} is equal to using "name".}
\item{translate_av}{If \code{type = "drug"}: a column name of the \link{antivirals} data set to translate the antibiotic abbreviations to, using \code{\link[=av_property]{av_property()}}. The default is \code{FALSE}. Using \code{TRUE} is equal to using "name".}
\item{thorough_search}{a \link{logical} to indicate whether the input must be extensively searched for misspelling and other faulty input values. Setting this to \code{TRUE} will take considerably more time than when using \code{FALSE}. At default, it will turn \code{TRUE} when all input elements contain a maximum of three words.}
\item{thorough_search}{A \link{logical} to indicate whether the input must be extensively searched for misspelling and other faulty input values. Setting this to \code{TRUE} will take considerably more time than when using \code{FALSE}. At default, it will turn \code{TRUE} when all input elements contain a maximum of three words.}
\item{info}{a \link{logical} to indicate whether a progress bar should be printed - the default is \code{TRUE} only in interactive mode}
\item{info}{A \link{logical} to indicate whether a progress bar should be printed - the default is \code{TRUE} only in interactive mode}
\item{...}{arguments passed on to \code{\link[=as.av]{as.av()}}}
\item{...}{Arguments passed on to \code{\link[=as.av]{as.av()}}}
}
\value{
A \link{list}, or a \link{character} if \code{collapse} is not \code{NULL}