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guess_ab_col, benchmarks

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dr. M.S. (Matthijs) Berends
2019-01-11 20:37:23 +01:00
parent 193a2d2863
commit 641d866db2
86 changed files with 2181 additions and 767 deletions
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tests/testthat/test-guess_ab_col.R Normal file
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# ==================================================================== #
# TITLE #
# Antimicrobial Resistance (AMR) Analysis #
# #
# SOURCE #
# https://gitlab.com/msberends/AMR #
# #
# LICENCE #
# (c) 2019 Berends MS (m.s.berends@umcg.nl), Luz CF (c.f.luz@umcg.nl) #
# #
# This R package is free software; you can freely use and distribute #
# it for both personal and commercial purposes under the terms of the #
# GNU General Public License version 2.0 (GNU GPL-2), as published by #
# the Free Software Foundation. #
# #
# This R package was created for academic research and was publicly #
# released in the hope that it will be useful, but it comes WITHOUT #
# ANY WARRANTY OR LIABILITY. #
# Visit our website for more info: https://msberends.gitab.io/AMR. #
# ==================================================================== #
context("guess_ab_col.R")
test_that("guess_ab_col works", {
expect_equal(guess_ab_col(septic_patients, "amox"),
"amox")
expect_equal(guess_ab_col(septic_patients, "amoxicillin"),
"amox")
expect_equal(guess_ab_col(septic_patients, "J01AA07"),
"tetr")
expect_equal(guess_ab_col(septic_patients, "tetracycline"),
"tetr")
expect_equal(guess_ab_col(septic_patients, "TETR"),
"tetr")
})