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Code Releases Activity

(v0.7.1.9033) 5000 new fungi

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dr. M.S. (Matthijs) Berends
2019-08-09 23:22:10 +02:00
parent 6a349bf757
commit 6598c5615d
31 changed files with 136 additions and 109 deletions
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docs/news/index.html
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@ -78,7 +78,7 @@
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">AMR (for R)</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">0.7.1.9032</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">0.7.1.9033</span>
</span>
</div>
@ -225,9 +225,9 @@
</div>
<div id="amr-0-7-1-9032" class="section level1">
<div id="amr-0-7-1-9033" class="section level1">
<h1 class="page-header">
<a href="#amr-0-7-1-9032" class="anchor"></a>AMR 0.7.1.9032<small> Unreleased </small>
<a href="#amr-0-7-1-9033" class="anchor"></a>AMR 0.7.1.9033<small> Unreleased </small>
</h1>
<div id="breaking" class="section level3">
<h3 class="hasAnchor">
@ -307,7 +307,8 @@
<li>Added support for unknown yeasts and fungi</li>
</ul>
</li>
<li>Added the newest taxonomic data from the IJSEM journal (now up to date until August 2019)</li>
<li>Updated the <code>microorganisms</code> data set to contain the latest taxonomic data from the IJSEM journal (now up to date until August 2019)</li>
<li>Added almost 5,000 new fungi to the <code>microorganisms</code> data set</li>
<li>Fix for using <code>mo_*</code> functions where the coercion uncertainties and failures would not be available through <code><a href="../reference/as.mo.html">mo_uncertainties()</a></code> and <code><a href="../reference/as.mo.html">mo_failures()</a></code> anymore</li>
<li>Deprecated the <code>country</code> parameter of <code><a href="../reference/mdro.html">mdro()</a></code> in favour of the already existing <code>guideline</code> parameter to support multiple guidelines within one country</li>
<li>The <code>name</code> of <code>RIF</code> is now Rifampicin instead of Rifampin</li>
@ -1232,7 +1233,7 @@ Using <code><a href="../reference/as.mo.html">as.mo(..., allow_uncertain = 3)</a
<div id="tocnav">
<h2>Contents</h2>
<ul class="nav nav-pills nav-stacked">
<li><a href="#amr-0-7-1-9032">0.7.1.9032</a></li>
<li><a href="#amr-0-7-1-9033">0.7.1.9033</a></li>
<li><a href="#amr-0-7-1">0.7.1</a></li>
<li><a href="#amr-0-7-0">0.7.0</a></li>
<li><a href="#amr-0-6-1">0.6.1</a></li>