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Update .gitlab-ci.yml

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dr. M.S. (Matthijs) Berends 2018-10-28 09:23:01 +00:00
parent b827e49b2f
commit 65dd2ac422
1 changed files with 29 additions and 32 deletions
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.gitlab-ci.yml
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@ -31,7 +31,7 @@ R 3:
artifacts: artifacts:
paths: paths:
- '*.Rcheck/*' - '*.Rcheck/*'
name: '$CI_COMMIT_REF_NAME' name: 'Latest Rcheck log'
expire_in: '1 month' expire_in: '1 month'
R 3.4: R 3.4:
@ -70,41 +70,38 @@ R 3.5:
- PKG_FILE_NAME=$(ls -1t *.tar.gz | head -n 1) - PKG_FILE_NAME=$(ls -1t *.tar.gz | head -n 1)
- R CMD check "${PKG_FILE_NAME}" --no-build-vignettes --no-manual --as-cran - R CMD check "${PKG_FILE_NAME}" --no-build-vignettes --no-manual --as-cran
R latest: #R latest:
image: rocker/r-ver:latest # rocker/r-base # image: rocker/r-ver:latest # rocker/r-base
stage: build # stage: build
allow_failure: true # allow_failure: true
script: # script:
- apt-get update # - apt-get update
# install dependencies for package # install dependencies for package
- apt-get install --yes --no-install-recommends libxml2-dev libssl-dev libcurl4-openssl-dev zlib1g-dev # - apt-get install --yes --no-install-recommends libxml2-dev libssl-dev libcurl4-openssl-dev zlib1g-dev
- R -e 'install.packages("devtools")' # - R -e 'install.packages("devtools")'
- R -e 'devtools::install_deps(dependencies = c("Depends", "Imports", "Suggests"))' # - R -e 'devtools::install_deps(dependencies = c("Depends", "Imports", "Suggests"))'
- R -e 'print(as.data.frame(installed.packages(), row.names = FALSE)[, c("Package", "Version")])' # - R -e 'print(as.data.frame(installed.packages(), row.names = FALSE)[, c("Package", "Version")])'
# remove vignettes folder and get VignetteBuilder field out of DESCRIPTION file # remove vignettes folder and get VignetteBuilder field out of DESCRIPTION file
- rm -rf vignettes # - rm -rf vignettes
- R -e 'd <- read.dcf("DESCRIPTION"); d[, colnames(d) == "VignetteBuilder"] <- NA; write.dcf(d, "DESCRIPTION")' # - R -e 'd <- read.dcf("DESCRIPTION"); d[, colnames(d) == "VignetteBuilder"] <- NA; write.dcf(d, "DESCRIPTION")'
- R CMD build . --no-build-vignettes --no-manual # - R CMD build . --no-build-vignettes --no-manual
- PKG_FILE_NAME=$(ls -1t *.tar.gz | head -n 1) # - PKG_FILE_NAME=$(ls -1t *.tar.gz | head -n 1)
- R CMD check "${PKG_FILE_NAME}" --no-build-vignettes --no-manual --as-cran # - R CMD check "${PKG_FILE_NAME}" --no-build-vignettes --no-manual --as-cran
R devel: # R devel:
image: rocker/r-ver:devel # rocker/r-base # image: rocker/r-ver:devel # rocker/r-base
stage: build # stage: build
allow_failure: true # allow_failure: true
script: # script:
- apt-get update # - apt-get update
# install dependencies for package # install dependencies for package
- apt-get install --yes --no-install-recommends libxml2-dev libssl-dev libcurl4-openssl-dev zlib1g-dev #- apt-get install --yes --no-install-recommends libxml2-dev libssl-dev libcurl4-openssl-dev zlib1g-dev
- R -e 'install.packages("devtools")' #- R -e 'install.packages("devtools")'
- R -e 'devtools::install_deps(dependencies = c("Depends", "Imports", "Suggests"))' # - R -e 'devtools::install_deps(dependencies = c("Depends", "Imports", "Suggests"))'
- R -e 'print(as.data.frame(installed.packages(), row.names = FALSE)[, c("Package", "Version")])' #- R -e 'print(as.data.frame(installed.packages(), row.names = FALSE)[, c("Package", "Version")])'
# remove vignettes folder and get VignetteBuilder field out of DESCRIPTION file # remove vignettes folder and get VignetteBuilder field out of DESCRIPTION file
- rm -rf vignettes #- rm -rf vignettes
- R -e 'd <- read.dcf("DESCRIPTION"); d[, colnames(d) == "VignetteBuilder"] <- NA; write.dcf(d, "DESCRIPTION")' # - R -e 'd <- read.dcf("DESCRIPTION"); d[, colnames(d) == "VignetteBuilder"] <- NA; write.dcf(d, "DESCRIPTION")'
- R CMD build . --no-build-vignettes --no-manual
- PKG_FILE_NAME=$(ls -1t *.tar.gz | head -n 1)
- R CMD check "${PKG_FILE_NAME}" --no-build-vignettes --no-manual --as-cran
coverage_job: coverage_job:
# image: rocker/r-ver:3 # image: rocker/r-ver:3