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Built site for AMR@3.0.0.9032: b11866a

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2025-09-13 12:12:30 +00:00
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@@ -7,7 +7,7 @@
<a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">3.0.0.9031</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">3.0.0.9032</small>
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
@@ -49,11 +49,11 @@
</div>
<div class="section level2">
<h2 class="pkg-version" data-toc-text="3.0.0.9031" id="amr-3009031">AMR 3.0.0.9031<a class="anchor" aria-label="anchor" href="#amr-3009031"></a></h2>
<h2 class="pkg-version" data-toc-text="3.0.0.9032" id="amr-3009032">AMR 3.0.0.9032<a class="anchor" aria-label="anchor" href="#amr-3009032"></a></h2>
<p>This is a bugfix release following the release of v3.0.0 in June 2025.</p>
<div class="section level4">
<h4 id="changed-3-0-0-9031">Changed<a class="anchor" aria-label="anchor" href="#changed-3-0-0-9031"></a></h4>
<ul><li>Allow support for newest <code>ggplot2</code> v4.0.0</li>
<h4 id="changed-3-0-0-9032">Changed<a class="anchor" aria-label="anchor" href="#changed-3-0-0-9032"></a></h4>
<ul><li>Fixed bugs introduced by <code>ggplot2</code> v4.0.0 (<a href="https://github.com/msberends/AMR/issues/236" class="external-link">#236</a>)</li>
<li>Fixed a bug in <code><a href="../reference/antibiogram.html">antibiogram()</a></code> for when no antimicrobials are set</li>
<li>Fixed a bug in <code><a href="../reference/antibiogram.html">antibiogram()</a></code> to allow column names containing the <code>+</code> character (<a href="https://github.com/msberends/AMR/issues/222" class="external-link">#222</a>)</li>
<li>Fixed a bug in <code><a href="../reference/as.ab.html">as.ab()</a></code> for antimicrobial codes with a number in it if they are preceded by a space</li>
@@ -72,7 +72,7 @@
<li>Added <code>names</code> to <code><a href="../reference/age_groups.html">age_groups()</a></code> so that custom names can be given (<a href="https://github.com/msberends/AMR/issues/215" class="external-link">#215</a>)</li>
<li>Added note to <code><a href="../reference/as.sir.html">as.sir()</a></code> to make it explicit when higher-level taxonomic breakpoints are used (<a href="https://github.com/msberends/AMR/issues/218" class="external-link">#218</a>)</li>
<li>Added antibiotic codes from the Comprehensive Antibiotic Resistance Database (CARD) to the <code>antimicrobials</code> data set (<a href="https://github.com/msberends/AMR/issues/225" class="external-link">#225</a>)</li>
<li>Updated Fosfomycin to be of antibiotic class ‘Phosphonics’ (<a href="https://github.com/msberends/AMR/issues/225" class="external-link">#225</a>)</li>
<li>Updated Fosfomycin to be of antibiotic class Phosphonics (<a href="https://github.com/msberends/AMR/issues/225" class="external-link">#225</a>)</li>
<li>Updated <code><a href="../reference/random.html">random_mic()</a></code> and <code><a href="../reference/random.html">random_disk()</a></code> to set skewedness of the distribution and allow multiple microorganisms</li>
</ul></div>
</div>