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(v2.1.1.9082) algorithm updates

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dr. M.S. (Matthijs) Berends
2024-09-30 18:46:55 +02:00
parent ac1c40d8bb
commit 681fe011fe
25 changed files with 15593 additions and 15505 deletions
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R/mo.R
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@@ -1081,6 +1081,9 @@ convert_colloquial_input <- function(x) {
out[x %like_case% "(^| )yeast?"] <- "F_YEAST"
out[x %like_case% "(^| )fung(us|i)"] <- "F_FUNGUS"
# protozoa
out[x %like_case% "protozo"] <- "P_PROTOZOAN" # to hit it with most languages, and "protozo" does not occur in the microorganisms data set for anything else
# trivial names known to the field
out[x %like_case% "meningo[ck]o[ck]"] <- "B_NESSR_MNNG"
out[x %like_case% "gono[ck]o[ck]"] <- "B_NESSR_GNRR"