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new antibiotics

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dr. M.S. (Matthijs) Berends
2019-05-10 16:44:59 +02:00
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</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">AMR (for R)</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.6.1.9002</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.6.1.9003</span>
</span>
</div>
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</a>
</li>
<li>
<a href="../reference/atc_property.html">
<a href="../reference/ab_property.html">
<span class="fa fa-capsules"></span>
Get properties of an antibiotic
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<h1>How to import data from SPSS / SAS / Stata</h1>
<h4 class="author">Matthijs S. Berends</h4>
<h4 class="date">05 April 2019</h4>
<h4 class="date">10 May 2019</h4>
<div class="hidden name"><code>SPSS.Rmd</code></div>
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<p>If you are working at a midsized or small company, you can save it tens of thousands of dollars by using R instead of e.g. SPSS - gaining even more functions and flexibility. And all R enthousiasts can do as much PR as they want (like I do here), because nobody is officially associated with or affiliated by R. It is really free.</p>
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<p>If you sometimes write syntaxes in SPSS to run a complete analysis or to ‘automate’ some of your work, you should perhaps do this in R. You will notice that writing syntaxes in R is a lot more nifty and clever than in SPSS.</p>
<p>If you sometimes write syntaxes in SPSS to run a complete analysis or to ‘automate’ some of your work, you should perhaps do this in R. You will notice that writing syntaxes in R is a lot more nifty and clever than in SPSS. Still, as working with any statistical package, you will have to have knowledge about what you are doing (statistically) and what you are willing to accomplish.</p>
<p>To demonstrate the first point:</p>
<div class="sourceCode" id="cb1"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb1-1" title="1"><span class="co"># not all values are valid MIC values:</span></a>
<a class="sourceLine" id="cb1-2" title="2"><span class="kw"><a href="../reference/as.mic.html">as.mic</a></span>(<span class="fl">0.125</span>)</a>
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<a class="sourceLine" id="cb1-21" title="21"><span class="co">#&gt; mo amox</span></a>
<a class="sourceLine" id="cb1-22" title="22"><span class="co">#&gt; 1 klebsiella R</span></a>
<a class="sourceLine" id="cb1-23" title="23"></a>
<a class="sourceLine" id="cb1-24" title="24"><span class="co"># hundreds of trade names can be translated to an ATC or name:</span></a>
<a class="sourceLine" id="cb1-25" title="25"><span class="kw"><a href="../reference/atc_property.html">atc_name</a></span>(<span class="st">"floxapen"</span>)</a>
<a class="sourceLine" id="cb1-24" title="24"><span class="co"># hundreds of trade names can be translated to a name, trade name or an ATC code:</span></a>
<a class="sourceLine" id="cb1-25" title="25"><span class="kw"><a href="../reference/ab_property.html">ab_name</a></span>(<span class="st">"floxapen"</span>)</a>
<a class="sourceLine" id="cb1-26" title="26"><span class="co">#&gt; [1] "Flucloxacillin"</span></a>
<a class="sourceLine" id="cb1-27" title="27"><span class="kw"><a href="../reference/as.atc.html">as.atc</a></span>(<span class="st">"floxapen"</span>)</a>
<a class="sourceLine" id="cb1-28" title="28"><span class="co">#&gt; Class 'atc'</span></a>
<a class="sourceLine" id="cb1-29" title="29"><span class="co">#&gt; [1] J01CF05</span></a>
<a class="sourceLine" id="cb1-30" title="30"><span class="kw"><a href="../reference/atc_property.html">atc_tradenames</a></span>(<span class="st">"floxapen"</span>)</a>
<a class="sourceLine" id="cb1-31" title="31"><span class="co">#&gt; [1] "Flopen" "Floxapen" "Fluclox" "Sesamol" "Softapen" "Staphylex"</span></a></code></pre></div>
<a class="sourceLine" id="cb1-27" title="27"><span class="kw"><a href="../reference/ab_property.html">ab_tradenames</a></span>(<span class="st">"floxapen"</span>)</a>
<a class="sourceLine" id="cb1-28" title="28"><span class="co">#&gt; [1] "Floxacillin" "FLOXACILLIN" "Floxapen" </span></a>
<a class="sourceLine" id="cb1-29" title="29"><span class="co">#&gt; [4] "Floxapen sodium salt" "Fluclox" "Flucloxacilina" </span></a>
<a class="sourceLine" id="cb1-30" title="30"><span class="co">#&gt; [7] "Flucloxacillin" "Flucloxacilline" "Flucloxacillinum" </span></a>
<a class="sourceLine" id="cb1-31" title="31"><span class="co">#&gt; [10] "Fluorochloroxacillin"</span></a>
<a class="sourceLine" id="cb1-32" title="32"><span class="kw"><a href="../reference/ab_property.html">ab_atc</a></span>(<span class="st">"floxapen"</span>)</a>
<a class="sourceLine" id="cb1-33" title="33"><span class="co">#&gt; Class 'atc'</span></a>
<a class="sourceLine" id="cb1-34" title="34"><span class="co">#&gt; [1] J01CF05</span></a></code></pre></div>
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<div id="import-data-from-spsssasstata" class="section level2">
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