fixes

2025-09-02 19:44:04 +02:00 · 2018-10-23 14:59:36 +02:00
parent 0062a3facb
commit 707aa20a37
6 changed files with 12 additions and 25 deletions
--- a/man/resistance_predict.Rd
+++ b/man/resistance_predict.Rd
@@ -73,13 +73,7 @@ septic_patients \%>\%
  # get bacteria properties like genus and species
  left_join_microorganisms("mo") \%>\%
  # calculate first isolates
-  mutate(first_isolate =
-           first_isolate(.,
-                         "date",
-                         "patient_id",
-                         "mo",
-                         col_specimen = NA,
-                         col_icu = NA)) \%>\%
+  mutate(first_isolate = first_isolate(.)) \%>\%
  # filter on first E. coli isolates
  filter(genus == "Escherichia",
         species == "coli",