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mirror of https://github.com/msberends/AMR.git synced 2024-12-26 19:26:12 +01:00

gitlab ci

This commit is contained in:
dr. M.S. (Matthijs) Berends 2019-01-05 21:08:56 +01:00
parent 4324337508
commit 73340f2ff8

View File

@ -33,9 +33,9 @@ stages:
image: debian:buster-slim image: debian:buster-slim
before_script: before_script:
- apt-get -qq update - apt-get update -qq
# install dependencies for packages # install dependencies for packages
- apt-get -y -qq install locales libxml2-dev libssl-dev libcurl4-openssl-dev zlib1g-dev pandoc r-base - apt-get -y install -qq locales libxml2-dev libssl-dev libcurl4-openssl-dev zlib1g-dev pandoc r-base
# set R system language # set R system language
- echo "LC_ALL=en_US.UTF-8" >> /etc/environment - echo "LC_ALL=en_US.UTF-8" >> /etc/environment
- echo "en_US.UTF-8 UTF-8" >> /etc/locale.gen - echo "en_US.UTF-8 UTF-8" >> /etc/locale.gen
@ -46,8 +46,10 @@ before_script:
- echo 'R_LIBS="installed_deps"' > .Renviron - echo 'R_LIBS="installed_deps"' > .Renviron
- echo 'R_LIBS_USER="installed_deps"' >> .Renviron - echo 'R_LIBS_USER="installed_deps"' >> .Renviron
- echo 'R_LIBS_SITE="installed_deps"' >> .Renviron - echo 'R_LIBS_SITE="installed_deps"' >> .Renviron
- echo 'LANGUAGE="en_US.utf8"' >> .Renviron
#- Rscript -e '.libPaths()' #- Rscript -e '.libPaths()'
# install missing and outdated packages # install missing and outdated packages
- Rscript -e 'sessionInfo()'
- Rscript -e 'source(".gitlab-ci.R"); gl_update_pkg_all(repos = "https://cran.rstudio.com", quiet = TRUE, install_pkgdown = TRUE)' - Rscript -e 'source(".gitlab-ci.R"); gl_update_pkg_all(repos = "https://cran.rstudio.com", quiet = TRUE, install_pkgdown = TRUE)'
cache: cache:
@ -66,7 +68,8 @@ R 3:
# - R CMD build . --no-build-vignettes --no-manual # - R CMD build . --no-build-vignettes --no-manual
- R CMD build . --no-manual - R CMD build . --no-manual
- PKG_FILE_NAME=$(ls -1t *.tar.gz | head -n 1) - PKG_FILE_NAME=$(ls -1t *.tar.gz | head -n 1)
- R CMD check "${PKG_FILE_NAME}" --no-build-vignettes --no-manual --as-cran # - R CMD check "${PKG_FILE_NAME}" --no-build-vignettes --no-manual --as-cran
- R CMD check "${PKG_FILE_NAME}" --no-manual --as-cran
artifacts: artifacts:
paths: paths:
- '*.Rcheck/*' - '*.Rcheck/*'