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added vanA to vanE positive Enterococci

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dr. M.S. (Matthijs) Berends
2018-09-05 09:49:19 +02:00
parent b388e3fee7
commit 790bd1622d
8 changed files with 9 additions and 9 deletions
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6
R/data.R
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@ -122,8 +122,8 @@
#' Data set with human pathogenic microorganisms
#'
#' A data set containing 2,664 (potential) human pathogenic microorganisms. MO codes can be looked up using \code{\link{guess_mo}}.
#' @format A \code{\link{tibble}} with 2,664 observations and 16 variables:
#' A data set containing 2,669 (potential) human pathogenic microorganisms. MO codes can be looked up using \code{\link{guess_mo}}.
#' @format A \code{\link{tibble}} with 2,669 observations and 16 variables:
#' \describe{
#' \item{\code{mo}}{ID of microorganism}
#' \item{\code{bactsys}}{Bactsyscode of microorganism}
@ -158,7 +158,7 @@
#' Translation table for UMCG with ~1,100 microorganisms
#'
#' A data set containing all bacteria codes of UMCG MMB. These codes can be joined to data with an ID from \code{\link{microorganisms}$mo} (using \code{\link{left_join_microorganisms}}). GLIMS codes can also be translated to valid \code{MO}s with \code{\link{guess_mo}}.
#' @format A \code{\link{tibble}} with 1,090 observations and 2 variables:
#' @format A \code{\link{tibble}} with 1,095 observations and 2 variables:
#' \describe{
#' \item{\code{umcg}}{Code of microorganism according to UMCG MMB}
#' \item{\code{mo}}{Code of microorganism in \code{\link{microorganisms}}}