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(v1.0.1.9006) added generic CLSI rules

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dr. M.S. (Matthijs) Berends
2020-04-14 14:12:31 +02:00
parent d1cb7d3b6f
commit 7a6f819232
23 changed files with 4318 additions and 496 deletions
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docs/news/index.html
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@ -81,7 +81,7 @@
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">AMR (for R)</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.0.1.9005</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.0.1.9006</span>
</span>
</div>
@ -229,13 +229,13 @@
<small>Source: <a href='https://gitlab.com/msberends/AMR/blob/master/NEWS.md'><code>NEWS.md</code></a></small>
</div>
<div id="amr-1019005" class="section level1">
<h1 class="page-header" data-toc-text="1.0.1.9005">
<a href="#amr-1019005" class="anchor"></a>AMR 1.0.1.9005<small> Unreleased </small>
<div id="amr-1019006" class="section level1">
<h1 class="page-header" data-toc-text="1.0.1.9006">
<a href="#amr-1019006" class="anchor"></a>AMR 1.0.1.9006<small> Unreleased </small>
</h1>
<div id="last-updated-13-apr-2020" class="section level2">
<div id="last-updated-14-apr-2020" class="section level2">
<h2 class="hasAnchor">
<a href="#last-updated-13-apr-2020" class="anchor"></a><small>Last updated: 13-Apr-2020</small>
<a href="#last-updated-14-apr-2020" class="anchor"></a><small>Last updated: 14-Apr-2020</small>
</h2>
<div id="new" class="section level3">
<h3 class="hasAnchor">
@ -260,6 +260,8 @@
</ul>
</li>
<li>Added more abbreviations to the <code>antibiotics</code> data set</li>
<li>Reloaded original EUCAST master tables from 2019 (2020 was already available). This seems more reliable than the data we used from WHONET.</li>
<li>Added generic CLSI rules for R/SI interpretation using <code><a href="../reference/as.rsi.html">as.rsi()</a></code> for years 2010-2019 (thanks to Anthony Underwood)</li>
</ul>
</div>
<div id="other" class="section level3">