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(v1.0.1.9006) added generic CLSI rules

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dr. M.S. (Matthijs) Berends 2020-04-14 14:12:31 +02:00
parent d1cb7d3b6f
commit 7a6f819232
23 changed files with 4318 additions and 496 deletions
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4
DESCRIPTION
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@ -1,6 +1,6 @@
Package: AMR Package: AMR
Version: 1.0.1.9005 Version: 1.0.1.9006
Date: 2020-04-13 Date: 2020-04-14
Title: Antimicrobial Resistance Analysis Title: Antimicrobial Resistance Analysis
Authors@R: c( Authors@R: c(
person(role = c("aut", "cre"), person(role = c("aut", "cre"),

6
NEWS.md
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@ -1,5 +1,5 @@
# AMR 1.0.1.9005 # AMR 1.0.1.9006
## <small>Last updated: 13-Apr-2020</small> ## <small>Last updated: 14-Apr-2020</small>
### New ### New
* Support for easy principal component analysis for AMR, using the new `pca()` function * Support for easy principal component analysis for AMR, using the new `pca()` function
@ -13,6 +13,8 @@
* Small fix for preventing viruses being treated as bacteria * Small fix for preventing viruses being treated as bacteria
* Small fix for preventing contamination and lack of growth being treated as valid microorganisms * Small fix for preventing contamination and lack of growth being treated as valid microorganisms
* Added more abbreviations to the `antibiotics` data set * Added more abbreviations to the `antibiotics` data set
* Reloaded original EUCAST master tables from 2019 (2020 was already available). This seems more reliable than the data we used from WHONET.
* Added generic CLSI rules for R/SI interpretation using `as.rsi()` for years 2010-2019 (thanks to Anthony Underwood)
### Other ### Other
* Support for the upcoming `dplyr` version 1.0.0 * Support for the upcoming `dplyr` version 1.0.0

11
R/ab.R
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@ -253,7 +253,7 @@ as.ab <- function(x, ...) {
next next
} }
} }
if (!isFALSE(list(...)$initial_search)) { if (!isFALSE(list(...)$initial_search)) {
# transform back from other languages and try again # transform back from other languages and try again
x_translated <- paste(lapply(strsplit(x[i], "[^a-zA-Z0-9 ]"), x_translated <- paste(lapply(strsplit(x[i], "[^a-zA-Z0-9 ]"),
@ -294,6 +294,15 @@ as.ab <- function(x, ...) {
} }
} }
# try by removing all trailing capitals
if (x[i] %like_case% "[a-z]+[A-Z]+$") {
found <- suppressWarnings(as.ab(gsub("[A-Z]+$", "", x[i])))
if (length(found) > 0 & !is.na(found)) {
x_new[i] <- found[1L]
next
}
}
# not found # not found
x_unknown <- c(x_unknown, x_bak[x[i] == x_bak_clean][1]) x_unknown <- c(x_unknown, x_bak[x[i] == x_bak_clean][1])
} }

10
R/like.R
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@ -21,7 +21,7 @@
#' Pattern Matching #' Pattern Matching
#' #'
#' Convenient wrapper around [base::grep()] to match a pattern: `a %like% b`. It always returns a [`logical`] vector and is always case-insensitive (use `a %like_case% b` for case-sensitive matching). Also, `pattern` (*b*) can be as long as `x` (*a*) to compare items of each index in both vectors, or they both can have the same length to iterate over all cases. #' Convenient wrapper around [grep()] to match a pattern: `x %like% pattern`. It always returns a [`logical`] vector and is always case-insensitive (use `x %like_case% pattern` for case-sensitive matching). Also, `pattern` can be as long as `x` to compare items of each index in both vectors, or they both can have the same length to iterate over all cases.
#' @inheritSection lifecycle Stable lifecycle #' @inheritSection lifecycle Stable lifecycle
#' @param x a character vector where matches are sought, or an object which can be coerced by [as.character()] to a character vector. #' @param x a character vector where matches are sought, or an object which can be coerced by [as.character()] to a character vector.
#' @param pattern a character string containing a regular expression (or [`character`] string for `fixed = TRUE`) to be matched in the given character vector. Coerced by [as.character()] to a character string if possible. If a [`character`] vector of length 2 or more is supplied, the first element is used with a warning. #' @param pattern a character string containing a regular expression (or [`character`] string for `fixed = TRUE`) to be matched in the given character vector. Coerced by [as.character()] to a character string if possible. If a [`character`] vector of length 2 or more is supplied, the first element is used with a warning.
@ -30,7 +30,9 @@
#' @name like #' @name like
#' @rdname like #' @rdname like
#' @export #' @export
#' @details Using RStudio? This function can also be inserted from the Addins menu and can have its own Keyboard Shortcut like `Ctrl+Shift+L` or `Cmd+Shift+L` (see `Tools` > `Modify Keyboard Shortcuts...`). #' @details When running a regular expression fails, these functions try again with `base::grepl(..., perl = TRUE)`.
#'
#' Using RStudio? This function can also be inserted from the Addins menu and can have its own Keyboard Shortcut like `Ctrl+Shift+L` or `Cmd+Shift+L` (see `Tools` > `Modify Keyboard Shortcuts...`).
#' @source Idea from the [`like` function from the `data.table` package](https://github.com/Rdatatable/data.table/blob/master/R/like.R), but made it case insensitive at default and let it support multiple patterns. Also, if the regex fails the first time, it tries again with `perl = TRUE`. #' @source Idea from the [`like` function from the `data.table` package](https://github.com/Rdatatable/data.table/blob/master/R/like.R), but made it case insensitive at default and let it support multiple patterns. Also, if the regex fails the first time, it tries again with `perl = TRUE`.
#' @seealso [base::grep()] #' @seealso [base::grep()]
#' @inheritSection AMR Read more on our website! #' @inheritSection AMR Read more on our website!
@ -52,7 +54,7 @@
#' # get frequencies of bacteria whose name start with 'Ent' or 'ent' #' # get frequencies of bacteria whose name start with 'Ent' or 'ent'
#' library(dplyr) #' library(dplyr)
#' example_isolates %>% #' example_isolates %>%
#' filter(mo_name(mo) %like% '^ent') %>% #' filter(mo_name(mo) %like% "^ent") %>%
#' freq(mo_genus(mo)) #' freq(mo_genus(mo))
like <- function(x, pattern, ignore.case = TRUE) { like <- function(x, pattern, ignore.case = TRUE) {
if (length(pattern) > 1) { if (length(pattern) > 1) {
@ -89,7 +91,7 @@ like <- function(x, pattern, ignore.case = TRUE) {
error = function(e) ifelse(grepl("Invalid regexp", e$message), error = function(e) ifelse(grepl("Invalid regexp", e$message),
# try with perl = TRUE: # try with perl = TRUE:
return(base::grepl(pattern = pattern, x = x, return(base::grepl(pattern = pattern, x = x,
ignore.case = ignore.case, perl = TRUE)), ignore.case = ignore.case, perl = TRUE)),
# stop otherwise # stop otherwise
stop(e$message))) stop(e$message)))
} }

2
R/mic.R
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@ -294,6 +294,6 @@ pillar_shaft.mic <- function(x, ...) {
#' @noRd #' @noRd
c.mic <- function(x, ...) { c.mic <- function(x, ...) {
y <- NextMethod() y <- NextMethod()
attributes(y) <- attributes(i) attributes(y) <- attributes(x)
y y
} }

16
R/mo.R
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@ -1745,9 +1745,13 @@ pillar_shaft.mo <- function(x, ...) {
# markup NA and UNKNOWN # markup NA and UNKNOWN
out[is.na(x)] <- pillar::style_na(" NA") out[is.na(x)] <- pillar::style_na(" NA")
out[x == "UNKNOWN"] <- pillar::style_na(" UNKNOWN") out[x == "UNKNOWN"] <- pillar::style_na(" UNKNOWN")
# make it always fit exactly # make it always fit exactly
pillar::new_pillar_shaft_simple(out, align = "left", width = max(nchar(x))) pillar::new_pillar_shaft_simple(out,
align = "left",
width = max(nchar(x)) + ifelse(length(x[x %in% c(NA, "UNKNOWN")]) > 0,
2,
0))
} }
#' @exportMethod summary.mo #' @exportMethod summary.mo
@ -1961,7 +1965,7 @@ load_mo_failures_uncertainties_renamed <- function(metadata) {
levenshtein_fraction <- function(input, output) { levenshtein_fraction <- function(input, output) {
levenshtein <- double(length = length(input)) levenshtein <- double(length = length(input))
for (i in seq_len(length(input))) { for (i in seq_len(length(input))) {
# determine levenshtein distance, but maximise to nchar of output # determine Levenshtein distance, but maximise to nchar of output
levenshtein[i] <- base::min(base::as.double(adist(input[i], output[i], ignore.case = TRUE)), levenshtein[i] <- base::min(base::as.double(adist(input[i], output[i], ignore.case = TRUE)),
base::nchar(output[i])) base::nchar(output[i]))
} }
@ -1975,8 +1979,10 @@ trimws2 <- function(x) {
parse_encoding <- function(x) { parse_encoding <- function(x) {
tryCatch({ tryCatch({
x <- unname(unlist(x))
parsed <- iconv(x, to = "UTF-8") parsed <- iconv(x, to = "UTF-8")
parsed[is.na(parsed) & !is.na(x)] <- iconv(x[is.na(parsed) & !is.na(x)], from = "Latin1", to = "ASCII//TRANSLIT") parsed[is.na(parsed) & !is.na(x)] <- iconv(x[is.na(parsed) & !is.na(x)], from = "Latin1", to = "ASCII//TRANSLIT")
gsub('"', "", parsed, fixed = TRUE) parsed <- gsub('"', "", parsed, fixed = TRUE)
}, error = function(e) stop(e$message, call. = FALSE)) }, error = function(e) stop(e$message, call. = FALSE)) # this will also be thrown when running `as.mo(no_existing_object)`
parsed
} }

545
data-raw/DRGLST.txt Normal file
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@ -0,0 +1,545 @@
ID WHON5_CODE WHON4_CODE WHO_CODE DIN_CODE JAC_CODE USER_CODE ANTIBIOTIC GUIDELINES CLSI EUCAST SFM SRGA BSAC DIN NEO AFA ABX_NUMBER POTENCY BETALACTAM CLASS SUBCLASS PROF_CLASS CLSI_ORDER HUMAN VETERINARY ANIMAL_GP WHO_IMPORT LOINCCOMP LOINCGEN LOINCDISK LOINCMIC LOINCETEST LOINCSLOW LOINCAFB LOINCSBT LOINCMLC CLSI19_DR CLSI19_DI CLSI19_DS CLSI19_MS CLSI19_MR CLSI18_DR CLSI18_DI CLSI18_DS CLSI18_MS CLSI18_MR CLSI17_DR CLSI17_DI CLSI17_DS CLSI17_MS CLSI17_MR CLSI16_DR CLSI16_DI CLSI16_DS CLSI16_MS CLSI16_MR CLSI15_DR CLSI15_DI CLSI15_DS CLSI15_MS CLSI15_MR CLSI14_DR CLSI14_DI CLSI14_DS CLSI14_MS CLSI14_MR CLSI13_DR CLSI13_DI CLSI13_DS CLSI13_MS CLSI13_MR CLSI12_DR CLSI12_DI CLSI12_DS CLSI12_MS CLSI12_MR CLSI11_DR CLSI11_DI CLSI11_DS CLSI11_MS CLSI11_MR CLSI10_DR CLSI10_DI CLSI10_DS CLSI10_MS CLSI10_MR EUCST19_DR EUCST19_DI EUCST19_DS EUCST19_MS EUCST19_MR EUCST18_DR EUCST18_DI EUCST18_DS EUCST18_MS EUCST18_MR EUCST17_DR EUCST17_DI EUCST17_DS EUCST17_MS EUCST17_MR EUCST16_DR EUCST16_DI EUCST16_DS EUCST16_MS EUCST16_MR EUCST15_DR EUCST15_DI EUCST15_DS EUCST15_MS EUCST15_MR EUCST14_DR EUCST14_DI EUCST14_DS EUCST14_MS EUCST14_MR EUCST13_DR EUCST13_DI EUCST13_DS EUCST13_MS EUCST13_MR ECV12_DR ECV12_DI ECV12_DS ECV12_MS ECV12_MR EUCST11_DR EUCST11_DI EUCST11_DS EUCST11_MS EUCST11_MR NEODK16_DR NEODK16_DI NEODK16_DS NEODK16_MS NEODK16_MR NEODK13_DR NEODK13_DI NEODK13_DS NEODK13_MS NEODK13_MR NEODK98_DR NEODK98_DI NEODK98_DS NEODK98_MS NEODK98_MR SFM07_DR SFM07_DI SFM07_DS SFM07_MS SFM07_MR DIN04_DR DIN04_DI DIN04_DS DIN04_MS DIN04_MR CRG96_DR CRG96_DI CRG96_DS CRG96_MS CRG96_MR AFA00_DR AFA00_DI AFA00_DS AFA00_MS AFA00_MR MENS00_DR MENS00_DI MENS00_DS MENS00_MS MENS00_MR SRGA98_DR SRGA98_DI SRGA98_DS SRGA98_MS SRGA98_MR BSAC00_DR BSAC00_DI BSAC00_DS BSAC00_MS BSAC00_MR OTHER_DR OTHER_DI OTHER_DS OTHER_MS OTHER_MR
5 AMC AUG AMC AMC AMPC-CVA Amoxicillin/Clavulanic acid CLSI,EUCAST X X X X X 2 20/10ug X Beta-lactam+Inhibitors BL+INH 03 X Amoxicilli 18862-3 21-6 20-8 6977-3 25310-4 22-4 19-0 13 14-17 18 8 32 13 14-17 18 8 32 13 14-17 18 8 32 13 14-17 18 8 32 13 14-17 18 8 32 13 14-17 18 8 32 13 14-17 18 8 32 13 14-17 18 8 32 13 14-17 18 8 32 13 14-17 18 8 32 11 12 8 16 13 14-20 21 4 32 20 21-27 28 2 16 2 32 17 - 18 8 16
99 APX APX APX ASP ASPC Aspoxicillin 213 X Penicillins Ureidopenicillin PEN 01c
6 AMC AU2 AMC AMC AMPC-CVA Amoxicillin/Clavulanic acid BSAC,EUCAST(HAE) X X 306 2/1ug X Beta-lactam+Inhibitors BL+INH 03 X Amoxicilli 18862-3 21-6 20-8 6977-3 25310-4 22-4 19-0 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 4 32 2 16 2 32 8 16
7 BDP BDP BDP Brodimoprim 220 Folate pathway inhibitors FOLATE 12a
8 BUT BUC BUT Butoconazole 221 Antifungals FUNG 29
9 CAP CAP CPR Capreomycin 128 Antimycobacterials MYCO 28 Capreomyci 18872-2 57-0 56-2 23607-5 58-8 55-4
11 CRB CAR CB CAR Carbenicillin CLSI,BSAC X X 9 100ug X Penicillins Carboxypenicillin PEN 01d X Carbenicil 18873-0 61-2 60-4 41668-5 62-0 59-6 19 20-22 23 16 64 19 20-22 23 16 64 12 - 13 128 256
12 CAR CAM CAR CAM CRMN Carumonam 148 X Monobactams MONO 06
13 CAS CAS CAS Caspofungin CLSI,NEO X 441 5ug Antifungals FUNG 29 Caspofungi 32378-2
14 CAC FAC CAC CAC Cefacetrile 149 30ug X Cephems Cephalosporin I CEPH1 04a
15 CEC CFC CEC CEC CCL Cefaclor CLSI,EUCAST X X X X 10 30ug X Cephems-Oral Cephalosporin CEPH-ORAL 05a X Cefaclor 18874-8 85-1 84-4 6986-4 86-9 83-6 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 2 16 1 8 4 32 13 14-34 35 1 16 34 - 35 1 2
17 BEK BEK AKM Bekanamycin 444 Aminoglycosides AG 09
91 SAM AS2 SAM AMS ABPC-SBT Ampicillin/Sulbactam DIN X 211 20/10ug X Beta-lactam+Inhibitors BL+INH 03 X Ampicillin 18865-6 33-1 32-3 6980-7 20374-5 23618-2 34-9 31-5 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 4 32 15 16-24 25 2 16
92 SAM AS3 SAM AMS ABPC-SBT Ampicillin/Sulbactam NEO X 334 30/30ug X Beta-lactam+Inhibitors BL+INH 03 X Ampicillin 18865-6 33-1 32-3 6980-7 20374-5 23618-2 34-9 31-5 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 4 32 2 16
93 AMR AMR Amprolium 405 Coccidiostats COCC 27
94 ANI ANI Anidulafungin 477 Antifungals FUNG 29
95 APL APA APL APL Apalcillin 144 X Penicillins Ureidopenicillin PEN 01c
96 APR AP1 APR Apramycin CLSI X 400 15ug Aminoglycosides AG 09 X Apramycin 23659-6 73653-8 73652-0
2 BAC BAC B BTC BC Bacitracin zinc CLSI,SFM X X 8 10units Polypeptides POLYPEP 26 X Bacitracin 18870-6 10868-8 6827-0 6983-1 14 - 15 2 4
3 AMX AX3 AMX AMX AMPC Amoxicillin NEO X 330 30ug X Penicillins Aminopenicillin PEN 01b X Amoxicilli 18861-5 17-4 16-6 6976-5 18-2 15-8 14 15-27 28 4 32 2 16 2 32 2 32
4 AMX AMX AMX AMX AMPC Amoxicillin 485 2ug X Penicillins Aminopenicillin PEN 01b X Amoxicilli 18861-5 17-4 16-6 6976-5 18-2 15-8 4 32 2 16 2 32 2 32
123 CPC CPC CEPM-CVA Cefepime/Clavulanic acid 432 X Beta-lactam+Inhibitors BL+INH 03 Cefepime+C 42353-3 42350-9 42351-7 35763-2
34 CCP CEP CFPN Cefcapene 152 5ug X Cephems Cephalosporin III CEPH3 04c
36 AMC AU5 AMC AMC AMPC-CVA Amoxicillin/Clavulanic acid 307 25/2ug X Beta-lactam+Inhibitors BL+INH 03 X Amoxicilli 18862-3 21-6 20-8 6977-3 25310-4 22-4 19-0 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 4 32 2 16 2 32 8 16
18 BES BES Besifloxacin CLSI X 486 Quinolones Fluoroquinolone FQ 11b X 73606-6 73651-2 73628-0
19 BIA BIA BIPM Biapenem CLSI X 218 X Penems Carbapenems CARB 07a Biapenem 41728-7 41666-9 41665-1 41667-7
20 BCZ BCZ BCZ Bicyclomycin (Bicozamycin) 219 Rho factor inhibitors RHO 27
21 AMX AMX AMX AMX AMPC Amoxicillin CLSI X X 82 30ug X Penicillins Aminopenicillin PEN 01b X Amoxicilli 18861-5 17-4 16-6 6976-5 18-2 15-8 13 14-20 21 4 32 2 16 2 32 2 32
150 CTL CTL CTZ Ceftezole 450 X Cephems Cephalosporin I CEPH1 04a
22 AMX AX1 AMX AMX AMPC Amoxicillin EUCAST X X 210 10ug X Penicillins Aminopenicillin PEN 01b X Amoxicilli 18861-5 17-4 16-6 6976-5 18-2 15-8 8 16 4 32 15 16-22 23 2 16 2 32 2 32
24 CFR DRX CFR CFR CDX Cefadroxil EUCAST X X X X 70 30ug X Cephems-Oral Cephalosporin CEPH-ORAL 05a X Cefadroxil 18875-5 65-3 64-6 66-1 63-8 11 - 12 16 32 11 12-17 18 8 64 13 14-29 30 1 16 24 - 25 1 2
25 RID RID CD CLO Cefaloridine 71 30ug X Cephems Cephalosporin I CEPH1 04a Cephalorid 18899-5 158-6 157-8 41684-2 156-0 1 2
26 MAN MAN MA CMD CMD Cefamandole CLSI,SFM,DIN,BSAC X X X X 11 30ug X Cephems Cephalosporin II CEPH2 04b X Cefamandol 18876-3 69-5 68-7 41669-3 70-3 67-9 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-21 22 8 64 4 16 4 32 19 - 20 8 16
27 MAN MA6 MA CMD CMD Cefamandole NEO X 338 60ug X Cephems Cephalosporin II CEPH2 04b X Cefamandol 18876-3 69-5 68-7 41669-3 70-3 67-9 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 64 4 16 4 32 8 16
97 APR APR APR Apramycin NEO X 145 40ug Aminoglycosides AG 09 Apramycin 23659-6
30 CNX CNX CNX CFX CMNX Cefminox 229 X Cephems Cephamycin CEPHAM 04e
31 CZO CFZ CZ CEZ CEZ Cefazolin CLSI,DIN X X 12 30ug X Cephems Cephalosporin I CEPH1 04a X Cefazolin 18878-9 77-8 76-0 41670-1 78-6 75-2 19 20-22 23 2 8 19 20-22 23 2 8 19 20-22 23 2 8 19 20-22 23 2 8 19 20-22 23 2 8 19 20-22 23 2 8 19 20-22 23 2 8 19 20-22 23 2 8 19 20-22 23 2 8 14 15-17 18 1 4 19 20-21 22 4 16
32 CZO CZ6 CZ CEZ Cefazolin NEO X 339 60ug X Cephems Cephalosporin I CEPH1 04a X Cefazolin 18878-9 77-8 76-0 41670-1 78-6 75-2 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 4 16
33 CFB CFB CFB CBZ CBPZ Cefbuperazone 223 X Cephems Cephamycin CEPHAM 04e
58 CMZ CMZ CMZ CMT CMZ Cefmetazole CLSI X 99 30ug X Cephems Cephamycin CEPHAM 04e X Cefmetazol 18881-3 89-3 88-5 11575-8 90-1 87-7 12 13-15 16 16 64 12 13-15 16 16 64 12 13-15 16 16 64 12 13-15 16 16 64 12 13-15 16 16 64 12 13-15 16 16 64 12 13-15 16 16 64 12 13-15 16 16 64 12 13-15 16 16 64 12 13-15 16 16 64
35 CCX CCX CCP Cefcapene pivoxil 445 X Cephems-Oral Cephalosporin CEPH-ORAL 05a
1 BAM BAM BAC BAPC Bacampicillin 147 X Penicillins Aminopenicillin PEN 01b Bacampicil 18869-8 49-7 48-9 50-5 47-1
37 AMC AU3 AMC AMC AMPC-CVA Amoxicillin/Clavulanic acid NEO X 331 30/15ug X Beta-lactam+Inhibitors BL+INH 03 X Amoxicilli 18862-3 21-6 20-8 6977-3 25310-4 22-4 19-0 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 14 15-27 28 4 32 2 16 2 32 8 16
38 AXS AXS AMC AMPC-SBT Amoxicillin/Sulbactam 3 X Beta-lactam+Inhibitors BL+INH 03
39 AMB AMB AB APH AMPH-B Amphotericin B CLSI,NEO X X 127 10ug Antifungals FUNG 29 Amphoteric 18863-1 25-7 24-0 6978-1 26-5 23-2 1 2
40 AMP AM2 AM AMP ABPC Ampicillin EUCAST X X 309 2ug X Penicillins Aminopenicillin PEN 01b X Ampicillin 18864-9 29-9 28-1 6979-9 30-7 27-3 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 16 4 32 2 16 2 32 2 32 1 16 8 16
153 CRO CRO CRO CRO CTRX Ceftriaxone CLSI,EUCAST X X X X X X X 20 30ug X Cephems Cephalosporin III CEPH3 04c X Ceftriaxon 18895-3 142-0 141-2 6998-9 25367-4 143-8 140-4 19 20-22 23 1 4 19 20-22 23 1 4 19 20-22 23 1 4 19 20-22 23 1 4 19 20-22 23 1 4 19 20-22 23 1 4 19 20-22 23 1 4 19 20-22 23 1 4 19 20-22 23 1 4 19 20-22 23 1 4 19 20-22 23 1 4 12 13-25 26 14 15-20 21 4 64 16 17-20 21 4 32 20 21-27 28 2 16 26 27-29 30 .5 2 27 - 28 1 2
41 AMP AM5 AM AMP ABPC Ampicillin BSAC X 308 25ug X Penicillins Aminopenicillin PEN 01b X Ampicillin 18864-9 29-9 28-1 6979-9 30-7 27-3 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 4 32 2 16 2 32 2 32 1 16 8 16
42 AMP AM1 AM AMP ABPC Ampicillin NEO X 332 2.5ug X Penicillins Aminopenicillin PEN 01b X Ampicillin 18864-9 29-9 28-1 6979-9 30-7 27-3 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 4 32 2 16 2 32 2 32 1 16 8 16
43 AMP AM3 AM AMP ABPC Ampicillin NEO X 333 33ug X Penicillins Aminopenicillin PEN 01b X Ampicillin 18864-9 29-9 28-1 6979-9 30-7 27-3 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 14 15-27 28 4 32 2 16 2 32 2 32 1 16 8 16
10 CRB CA5 CB CAR Carbenicillin NEO X 337 115ug X Penicillins Carboxypenicillin PEN 01d X Carbenicil 18873-0 61-2 60-4 41668-5 62-0 59-6 16 64 16 64 16 64 16 64 16 64 16 64 16 64 16 64 16 64 16 64 9 10-27 28 128 256
152 CTB BUT CTB CIB CETB Ceftibuten CLSI,EUCAST X X X 140 30ug X Cephems-Oral Cephalosporin CEPH-ORAL 05a X Ceftibuten 35779-8 35777-2 35778-0 6996-3 17 18-20 21 8 32 17 18-20 21 8 32 17 18-20 21 8 32 17 18-20 21 8 32 17 18-20 21 8 32 17 18-20 21 8 32 17 18-20 21 8 32 17 18-20 21 8 32 17 18-20 21 8 32 17 18-20 21 8 32 20 - 21 1 2 2 16 1 8 23 24-26 27 1 8 1 2
44 CFM FIX CFM CFI CFIX Cefixime CLSI,EUCAST X X X X 69 5ug X Cephems-Oral Cephalosporin CEPH-ORAL 05a X Cefixime 18880-5 81-0 80-2 35766-5 82-8 79-4 15 16-18 19 1 4 15 16-18 19 1 4 15 16-18 19 1 4 15 16-18 19 1 4 15 16-18 19 1 4 15 16-18 19 1 4 15 16-18 19 1 4 15 16-18 19 1 4 15 16-18 19 1 4 15 16-18 19 1 4 16 - 17 1 2 1 4 1 4 19 - 20 1 2
45 CFM FI1 CFM CFI CFIX Cefixime SFM,DIN X X 186 10ug X Cephems-Oral Cephalosporin CEPH-ORAL 05a X Cefixime 18880-5 81-0 80-2 35766-5 82-8 79-4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 21 22-24 25 1 4 21 22-25 26 1 4 1 2
46 CFM FI3 CFM CFI CFIX Cefixime NEO X 340 30ug X Cephems-Oral Cephalosporin CEPH-ORAL 05a X Cefixime 18880-5 81-0 80-2 35766-5 82-8 79-4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 2
47 CZP CZP CZX-AP Ceftizoxime alapivoxil 447 X Cephems Cephalosporin III CEPH3 04c
48 CMX ME0 CMX CMX CMX Cefmenoxime DIN X 228 10ug X Cephems Cephalosporin III CEPH3 04c Cefmenoxim 32375-8 2 16 1 4
49 CTE CTE CH CTE Chlortetracycline 91 Tetracyclines TETRA 24 Chlortetra 18904-3 178-4 177-6 179-2 176-8
50 CIC CCL CI ACPC Ciclacillin 159 X Penicillins Aminopenicillin PEN 01b Cyclacilli 18913-4 210-5 209-7 211-3 208-9
51 CIN CI3 CIN CIN CINX Cinoxacin SRGA,NEO X X 191 30ug Quinolones Quinolone QUIN 11a X Cinoxacin 18905-0 182-6 181-8 183-4 180-0 16 64 16 64 16 64 16 64 16 64 16 64 16 64 16 64 16 64 16 64 15 16-19 20 8 32
52 CIN CIN CIN CIN CINX Cinoxacin CLSI X 25 100ug Quinolones Quinolone QUIN 11a X Cinoxacin 18905-0 182-6 181-8 183-4 180-0 14 15-18 19 16 64 14 15-18 19 16 64 14 15-18 19 16 64 14 15-18 19 16 64 14 15-18 19 16 64 14 15-18 19 16 64 14 15-18 19 16 64 14 15-18 19 16 64 14 15-18 19 16 64 14 15-18 19 16 64 8 32
53 CIP CI0 CIP CPFX Ciprofloxacin AFA,SRGA,NEO X X X 192 10ug Quinolones Fluoroquinolone FQ 11b X Ciprofloxa 18906-8 186-7 185-9 7002-9 20377-8 23621-6 187-5 184-2 0.25 1 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 12 13-23 24 1 4 1 4 1 4 18 19-26 27 .25 4 17 18-23 24 .125 2 1 2
98 ARB ARB ARB ABK Arbekacin 212 Aminoglycosides AG 09 Arbekacin 32373-3
29 CZD CZD CZD CZD Cefazedone 222 X Cephems Cephalosporin I CEPH1 04a
54 CIP CI5 CIP CPFX Ciprofloxacin NEO X 346 .5ug Quinolones Fluoroquinolone FQ 11b X Ciprofloxa 18906-8 186-7 185-9 7002-9 20377-8 23621-6 187-5 184-2 0.25 1 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 .25 4 .125 2 1 2
55 CIP CI1 CIP CPFX Ciprofloxacin BSAC X 314 1ug Quinolones Fluoroquinolone FQ 11b X Ciprofloxa 18906-8 186-7 185-9 7002-9 20377-8 23621-6 187-5 184-2 0.25 1 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 .25 4 .125 2 17 - 18 1 2
56 CIP CIP CIP CPFX Ciprofloxacin CLSI,EUCAST X X X X X 26 5ug Quinolones Fluoroquinolone FQ 11b X Ciprofloxa 18906-8 186-7 185-9 7002-9 20377-8 23621-6 187-5 184-2 21 22-25 26 0.25 1 15 16-20 21 1 4 15 16-20 21 1 4 15 16-20 21 1 4 15 16-20 21 1 4 15 16-20 21 1 4 15 16-20 21 1 4 15 16-20 21 1 4 15 16-20 21 1 4 15 16-20 21 1 4 18 19-21 22 0.5 2 21 22-24 25 .5 2 18 19-22 23 1 4 1 4 .25 4 .125 2 1 2
57 CLR CL3 CLR CLR CAM Clarithromycin NEO X 347 30ug Macrolides 14-Membered ring MACRO 17 X Clarithrom 18907-6 190-9 189-1 7003-7 20375-2 23619-0 191-7 188-3 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 12 13-21 22 2 8 .5 4 1 4 .5 1 .5 1
28 CTZ FAT CTZ CRI CFT Cefatrizine SFM X 151 10ug X Cephems-Oral Cephalosporin CEPH-ORAL 05a Cefatrizin 18877-1 73-7 72-9 74-5 71-1 14 15-21 22 2 16
59 CLR CLA CLR CLR CAM Clarithromycin CLSI,EUCAST X X X X X 103 15ug Macrolides 14-Membered ring MACRO 17a X Clarithrom 18907-6 190-9 189-1 7003-7 20375-2 23619-0 191-7 188-3 13 14-17 18 2 8 13 14-17 18 2 8 13 14-17 18 2 8 13 14-17 18 2 8 13 14-17 18 2 8 13 14-17 18 2 8 13 14-17 18 2 8 13 14-17 18 2 8 13 14-17 18 2 8 13 14-17 18 2 8 16 17-20 21 2 8 .5 4 16 17-20 21 1 4 19 20-24 25 .5 1 .5 1
60 CLR CR2 CLR CLR CAM Clarithromycin X 410 2ug Macrolides 14-Membered ring MACRO 17 X Clarithrom 18907-6 190-9 189-1 7003-7 20375-2 23619-0 191-7 188-3 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 .5 4 1 4 .5 1 19 - 20 .5 1
61 CED RAD CED CED CED Cephradine NEO X 74 60ug X Cephems-Oral Cephalosporin CEPH-ORAL 05a Cephradine 18902-7 170-1 169-3 171-9 168-5 8 64 4 32 2 4
62 CED RA3 CED CED CED Cephradine SFM,BSAC X X 408 30ug X Cephems-Oral Cephalosporin CEPH-ORAL 05a Cephradine 18902-7 170-1 169-3 171-9 168-5 11 12-17 18 8 64 4 32 11 - 12 2 4
151 CTB BU1 CTB CIB CETB Ceftibuten SFM,DIN,BSAC X X X 189 10ug X Cephems-Oral Cephalosporin CEPH-ORAL 05a X Ceftibuten 35779-8 35777-2 35778-0 6996-3 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 15 16-19 20 2 16 1 8 1 8 27 - 28 1 2
64 DIZ DIZ CDZ CFO CDZM Cefodizime DIN X 100 10ug X Cephems Cephalosporin III CEPH3 04c Cefodizime 18882-1 93-5 92-7 6988-0 94-3 91-9 15 16-17 18 4 16
65 CHL CH6 C CMP CP Chloramphenicol NEO X 345 60ug Phenicols PHEN 22 X Chloramphe 18903-5 174-3 173-5 7001-1 175-0 172-7 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 14 15-27 28 8 32 8 16 4 16 2 8 8 16 8 16
66 CMX MEN CMX CMX CMX Cefmenoxime SFM 85 30ug X Cephems Cephalosporin III CEPH3 04c Cefmenoxim 32375-8 2 16 1 4
67 CHL CHL C CMP CP Chloramphenicol CLSI,EUCAST X X X X X X X 24 30ug Phenicols PHEN 22 X Chloramphe 18903-5 174-3 173-5 7001-1 175-0 172-7 12 13-17 18 8 32 12 13-17 18 8 32 12 13-17 18 8 32 12 13-17 18 8 32 12 13-17 18 8 32 12 13-17 18 8 32 12 13-17 18 8 32 12 13-17 18 8 32 12 13-17 18 8 32 12 13-17 18 8 32 16 - 17 8 16 18 19-22 23 8 32 20 - 21 8 16 4 16 24 25-31 32 2 8 17 18-20 21 8 16 20 - 21 8 16
103 AVO AVO AVO Avoparcin 215 Glycopeptides Glycopeptide GLYCO 21a
73 FOX FOX FOX COX CFX Cefoxitin CLSI,EUCAST X X X X X X 17 30ug X Cephems Cephamycin CEPHAM 04e X Cefoxitin 18888-8 117-2 116-4 6991-4 25366-6 118-0 115-6 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-21 22 8 64 20 21-25 26 4 16 4 32 17 18-27 28 2 16 15 16-19 20 4 16 19 - 20 4 8
74 CPD PO1 CPD CPO CPDX Cefpodoxime 407 1ug X Cephems Cephalosporin III CEPH3 04c X Cefpodoxim 18890-4 121-4 120-6 6993-0 122-2 119-8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 1 4 1 4 1 2
100 AST AST AST AST ASTM Astromicin 146 Aminoglycosides AG 09
75 CPD PO5 CPD CPO CPDX Cefpodoxime BSAC X 311 5ug X Cephems-Oral Cephalosporin CEPH-ORAL 05a X Cefpodoxim 18890-4 121-4 120-6 6993-0 122-2 119-8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 1 4 1 4 33 - 34 1 2
76 CLI CL1 CM CLI CLDM Clindamycin AFA,SRGA X X 193 15ug Lincosamides LINCO 15 X Clindamyci 18908-4 194-1 193-3 7005-2 195-8 192-5 .5 4 .5 4 .5 4 .5 4 .5 4 .5 4 .5 4 .5 4 .5 4 .5 4 2 4 1 8 1 8 17 18-23 24 1 4 19 20-27 28 .5 4 .5 1
77 CLI CL2 CM CLI CLDM Clindamycin NEO X 348 25ug Lincosamides LINCO 15 X Clindamyci 18908-4 194-1 193-3 7005-2 195-8 192-5 .5 4 .5 4 .5 4 .5 4 .5 4 .5 4 .5 4 .5 4 .5 4 .5 4 14 15-27 28 2 4 1 8 1 8 1 4 .5 4 .5 1
78 CLF CLF Clofazimine 482 Antimycobacterials MYCO 28
79 CTR CLO CTR CTR Clotrimazole NEO X 158 10ug Antifungals FUNG 29 Clotrimazo 18909-2 10653-4 10654-2
80 CLR CL5 CLR CLR CAM Clarithromycin X 409 5ug Macrolides 14-Membered ring MACRO 17 X Clarithrom 18907-6 190-9 189-1 7003-7 20375-2 23619-0 191-7 188-3 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 .5 4 1 4 .5 1 .5 1
81 CLA CLV CLA CLA CVA Clavulanic acid CLSI X 246 X Beta-lactamase inhibitors BL-INH 02 Clavulanat 41733-7 41686-7 41687-5 41685-9
82 CLX CLN CLN Clinafloxacin CLSI X 157 5ug Quinolones Fluoroquinolone FQ 11b X Clinafloxa 32376-6 35785-5 35786-3 7004-5
68 CHL CH1 C CMP CP Chloramphenicol BSAC,NEO X X 313 10ug Phenicols PHEN 22 X Chloramphe 18903-5 174-3 173-5 7001-1 175-0 172-7 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 16 4 16 2 8 8 16 8 16
69 CTT CTN CTT CTT CTT Cefotetan CLSI,SFM,BSAC X X X 16 30ug X Cephems Cephamycin CEPHAM 04e X Cefotetan 18887-0 113-1 112-3 6990-6 114-9 111-5 12 13-15 16 16 64 12 13-15 16 16 64 12 13-15 16 16 64 12 13-15 16 16 64 12 13-15 16 16 64 12 13-15 16 16 64 12 13-15 16 16 64 12 13-15 16 16 64 12 13-15 16 16 64 12 13-15 16 16 64 12 13-23 24 16 17-22 23 4 64 4 32 4 32 23 - 24 4 8
70 CTF FOT CTF CTM CTM Cefotiam SFM,DIN X X 86 30ug X Cephems Cephamycin CEPHAM 04e Cefotiam 32374-1 35772-3 35773-1 14 15-21 22 4 64 16 17-19 20 4 16
71 CHE CHE CTH CTM-HE Cefotiam hexetil SFM X 235 10ug X Cephems-Oral Cephalosporin CEPH-ORAL 05a 18 19-21 22 1 4
72 CHE CHE CTH CTM-HE Cefotiam hexetil DIN X 435 30ug X Cephems-Oral Cephalosporin CEPH-ORAL 05a 20 21-25 26 1 8
83 CLI CLI CM CLI CLDM Clindamycin CLSI,EUCAST X X X X 27 2ug Lincosamides LINCO 15 X Clindamyci 18908-4 194-1 193-3 7005-2 195-8 192-5 14 15-20 21 .5 4 14 15-20 21 .5 4 14 15-20 21 .5 4 14 15-20 21 .5 4 14 15-20 21 .5 4 14 15-20 21 .5 4 14 15-20 21 .5 4 14 15-20 21 .5 4 14 15-20 21 .5 4 14 15-20 21 .5 4 14 - 15 2 4 1 8 1 8 1 4 .5 4 25 - 26 .5 1
84 FCT 5C1 FCT 5FC 5-FC 5-Fluorocytosine CLSI,NEO X X 328 10ug Antifungals FUNG 29 X 5-Fluorocy 18855-7 254-3 253-5 7014-4 255-0 252-7 4 32 4 32 4 32 4 32 4 32 4 32 4 32 4 32 4 32 8 16
85 FCT 5FC FCT 5-FC 5-Fluorocytosine CLSI,NEO X X 126 1ug Antifungals FUNG 29 X 5-Fluorocy 18855-7 254-3 253-5 7014-4 255-0 252-7 4 32 4 32 4 32 4 32 4 32 4 32 4 32 4 32 4 32 8 16
86 ACM ACM Acetylmidecamycin 114 Macrolides MACRO 17
87 ASP ASP Acetylspiramycin 113 Macrolides MACRO 17
63 CTO CTO CTO Cetocycline 245 Tetracyclines TETRA 24
108 ATM ATM ATM AZT AZT Aztreonam CLSI,EUCAST X X X X X X 7 30ug X Monobactams MONO 06 X Aztreonam 18868-0 45-5 44-8 6982-3 46-3 43-0 17 18-20 21 4 16 17 18-20 21 4 16 17 18-20 21 4 16 17 18-20 21 4 16 17 18-20 21 4 16 17 18-20 21 4 16 17 18-20 21 4 16 17 18-20 21 4 16 17 18-20 21 4 16 17 18-20 21 4 16 20 - 25 1 16 16 17-22 23 4 64 2 32 4 16 14 15-25 26 2 32 24 25-27 28 0.5 2 23 - 24 8 16
109 ATM AT1 ATM AZT AZT Aztreonam DIN X 217 10ug X Monobactams MONO 06 X Aztreonam 18868-0 45-5 44-8 6982-3 46-3 43-0 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 64 2 32 4 16 2 32 0.5 2 8 16
110 CID CID CID CNI Cefonicid CLSI X 13 30ug X Cephems Cephalosporin II CEPH2 04b X Cefonicid 18883-9 97-6 96-8 98-4 95-0 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32
111 CFP CFP CFP CPZ CPZ Cefoperazone CLSI X 14 75ug X Cephems Cephalosporin II CEPH2 04b X Cefoperazo 18884-7 101-6 100-8 35767-3 102-4 99-2 15 16-20 21 16 64 15 16-20 21 16 64 15 16-20 21 16 64 15 16-20 21 16 64 15 16-20 21 16 64 15 16-20 21 16 64 15 16-20 21 16 64 15 16-20 21 16 64 15 16-20 21 16 64 15 16-20 21 16 64 4 64 4 32 4 8
112 CFP CP1 CFP CPZ CPZ Cefoperazone DIN X 230 10ug X Cephems Cephalosporin II CEPH2 04b X Cefoperazo 18884-7 101-6 100-8 35767-3 102-4 99-2 16 64 16 64 16 64 16 64 16 64 16 64 16 64 16 64 16 64 16 64 4 64 14 15-20 21 4 32 4 8
113 CFP CF3 CFP CPZ CPZ Cefoperazone SFM,BSAC X X 187 30ug X Cephems Cephalosporin II CEPH2 04b X Cefoperazo 18884-7 101-6 100-8 35767-3 102-4 99-2 16 64 16 64 16 64 16 64 16 64 16 64 16 64 16 64 16 64 16 64 13 14-20 21 4 64 4 32 24 - 25 4 8
114 CFP CF6 CFP CPZ CPZ Cefoperazone NEO X 341 60ug X Cephems Cephalosporin II CEPH2 04b X Cefoperazo 18884-7 101-6 100-8 35767-3 102-4 99-2 16 64 16 64 16 64 16 64 16 64 16 64 16 64 16 64 16 64 16 64 4 64 4 32 4 8
115 CSL CFS CPS CPZ-SBT Cefoperazone/Sulbactam DIN X 101 30/15ug X Beta-lactam+Inhibitors BL+INH 03 35768-1 15 16-21 22
116 CND CND CND Ceforanide NEO X 231 30ug X Cephems-Oral Cephalosporin CEPH-ORAL 05a Ceforanide 18885-4 105-7 104-0 106-5 103-2
117 CSE CSE Cefoselis 448 X Cephems Cephalosporin IV CEPH4 04d
88 AMK AMK AN AMK AMK Amikacin CLSI,EUCAST X X X X X X 1 30ug Aminoglycosides AG 09 X Amikacin 18860-7 13-3 12-5 6975-7 20373-7 23624-0 14-1 11-7 14 15-16 17 16 64 14 15-16 17 16 64 14 15-16 17 16 64 14 15-16 17 16 64 14 15-16 17 16 64 14 15-16 17 16 64 14 15-16 17 16 64 14 15-16 17 16 64 14 15-16 17 16 64 14 15-16 17 16 64 12 13-15 16 8 32 14 15-16 17 8 32 13 14-19 20 4 32 4 32 15 16-18 19 4 8 19 - 20 4 8
89 AMP AMP AM AMP ABPC Ampicillin CLSI,EUCAST(EBC) X X X X X X X 4 10ug X Penicillins Aminopenicillin PEN 01b X Ampicillin 18864-9 29-9 28-1 6979-9 30-7 27-3 13 14-16 17 8 32 13 14-16 17 8 32 13 14-16 17 8 32 13 14-16 17 8 32 13 14-16 17 8 32 13 14-16 17 8 32 13 14-16 17 8 32 13 14-16 17 8 32 13 14-16 17 8 32 13 14-16 17 8 32 11 12 8 16 13 14-18 19 4 32 14 15-21 22 2 16 2 32 8 9-21 22 2 32 11 12-29 30 1 16 17 - 18 8 16
90 SAM AMS SAM AMS ABPC-SBT Ampicillin/Sulbactam CLSI,EUCAST X X X 5 10/10ug X Beta-lactam+Inhibitors BL+INH 03 X Ampicillin 18865-6 33-1 32-3 6980-7 20374-5 23618-2 34-9 31-5 11 12-14 15 8 32 11 12-14 15 8 32 11 12-14 15 8 32 11 12-14 15 8 32 11 12-14 15 8 32 11 12-14 15 8 32 11 12-14 15 8 32 11 12-14 15 8 32 11 12-14 15 8 32 11 12-14 15 8 32 8 16 13 14-18 19 4 32 2 16
101 AVB AVB Avibactam CLSI X 496 X Beta-lactamase inhibitors BL-INH
102 AVI AVI AVI AVM Avilamycin 214 Everninomycins EVER 27 Avilamycin 35756-6 35754-1 35755-8
104 AZM AZI AZM AZM Azithromycin CLSI,EUCAST X X X X X X X 83 15ug Macrolides 15-Membered ring MACRO 17a X Azithromyc 18866-4 37-2 36-4 6981-5 23612-5 38-0 35-6 13 14-17 18 2 8 13 14-17 18 2 8 13 14-17 18 2 8 13 14-17 18 2 8 13 14-17 18 2 8 13 14-17 18 2 8 13 14-17 18 2 8 13 14-17 18 2 8 13 14-17 18 2 8 13 14-17 18 2 8 16 17-21 22 .5 8 17 18-20 21 2 8 19 20-23 24 1 4 19 20-22 23 .5 1 19 - 20 1 2
105 AZM AI3 AZM AZM Azithromycin NEO X 335 30ug Macrolides 15-Membered ring MACRO 17 X Azithromyc 18866-4 37-2 36-4 6981-5 23612-5 38-0 35-6 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 12 13-21 22 .5 8 2 8 1 4 .5 1 1 2
106 AZL AZL AZL AZL Azlocillin CLSI,SFM X X 6 75ug X Penicillins Ureidopenicillin PEN 01c X Azlocillin 18867-2 41-4 40-6 41661-0 42-2 39-8 17 - 18 64 128 17 - 18 64 128 17 - 18 64 128 17 - 18 64 128 17 - 18 64 128 17 - 18 64 128 17 - 18 64 128 17 - 18 64 128 17 - 18 64 128 17 - 18 64 128 12 13-18 19 16 128 2 32
107 AZL AZ3 AZL AZL Azlocillin AFA,DIN,NEO X X X 216 30ug X Penicillins Ureidopenicillin PEN 01c X Azlocillin 18867-2 41-4 40-6 41661-0 42-2 39-8 64 128 64 128 64 128 64 128 64 128 64 128 64 128 64 128 64 128 64 128 14 15-27 28 16 128 12 13-21 22 15 16-27 28 2 32
118 CDR DIN CDR CFD CFDN Cefdinir CLSI X 96 5ug X Cephems-Oral Cephalosporin CEPH-ORAL 05a X Cefdinir 23636-4 35758-2 23637-2 35757-4 16 17-19 20 1 4 16 17-19 20 1 4 16 17-19 20 1 4 16 17-19 20 1 4 16 17-19 20 1 4 16 17-19 20 1 4 16 17-19 20 1 4 16 17-19 20 1 4 16 17-19 20 1 4 16 17-19 20 1 4
119 DIT DIT CDT CDTR Cefditoren CLSI X 153 5ug X Cephems-Oral Cephalosporin CEPH-ORAL 05a X Cefditoren 35762-4 35759-0 35761-6 35760-8
120 DIX DIX CDTR-PI Cefditoren pivoxil 446 X Cephems-Oral Cephalosporin CEPH-ORAL 05a
121 FEP FEP FEP CEP CEPM Cefepime CLSI,EUCAST X X X X X 97 30ug X Cephems Cephalosporin IV CEPH4 04d X Cefepime 18879-7 8272-7 6644-9 6987-2 8273-5 6643-1 18 19-24 25 2 16 18 19-24 25 2 16 18 19-24 25 2 16 18 19-24 25 2 16 18 19-24 25 2 16 18 19-24 25 2 16 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 17 18-23 24 1 16 14 15-27 28 14 15-20 21 4 64 4 32 23 24-26 27 .5 2 31 - 32 2 4
122 FEP FE1 FEP CEP CEPM Cefepime DIN X 224 10ug X Cephems Cephalosporin IV CEPH4 04d X Cefepime 18879-7 8272-7 6644-9 6987-2 8273-5 6643-1 2 16 2 16 2 16 2 16 2 16 2 16 8 32 8 32 8 32 8 32 4 64 12 13-18 19 4 32 .5 2 2 4
124 CTX FTX CTX CTX CTX Cefotaxime CLSI,SFM,SRGA,BSAC X X X X X 15 30ug X Cephems Cephalosporin III CEPH3 04c X Cefotaxime 18886-2 109-9 108-1 6989-8 110-7 107-3 22 23-25 26 1 4 22 23-25 26 1 4 22 23-25 26 1 4 22 23-25 26 1 4 22 23-25 26 1 4 22 23-25 26 1 4 22 23-25 26 1 4 22 23-25 26 1 4 22 23-25 26 1 4 22 23-25 26 1 4 14 15-27 28 14 15-20 21 4 64 2 16 4 32 20 21-26 27 2 16 23 24-26 27 .5 2 29 - 30 1 2
125 CTX FT5 CTX CTX CTX Cefotaxime EUCAST X X 406 5ug X Cephems Cephalosporin III CEPH3 04c X Cefotaxime 18886-2 109-9 108-1 6989-8 110-7 107-3 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 17 18-20 21 1 4 4 64 2 16 4 32 2 16 .5 2 1 2
126 CTX FT1 CTX CTX CTX Cefotaxime DIN X 232 10ug X Cephems Cephalosporin III CEPH3 04c X Cefotaxime 18886-2 109-9 108-1 6989-8 110-7 107-3 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 4 64 13 14-20 21 2 16 4 32 2 16 .5 2 1 2
127 CTC CTC CTX-CVA Cefotaxime/Clavulanic acid CLSI X 394 30/10ug X Beta-lactam+Inhibitors BL+INH 03 X Cefotaxime 35771-5 35769-9 35770-7 41671-9
128 CTS CTS CTS CTX-SBT Cefotaxime/Sulbactam DIN X 233 10/15ug X Beta-lactam+Inhibitors BL+INH 03 2 16
129 CTT CT1 CTT CTT CTT Cefotetan DIN X 234 10ug X Cephems Cephamycin CEPHAM 04e X Cefotetan 18887-0 113-1 112-3 6990-6 114-9 111-5 16 64 16 64 16 64 16 64 16 64 16 64 16 64 16 64 16 64 16 64 4 64 4 32 4 32 4 8
130 CAT FET CAT CFT CEMT Cefetamet CLSI X 98 10ug X Cephems-Oral Cephalosporin CEPH-ORAL 05a X Cefetamet 32377-4 35764-0 35765-7 14 15-17 18 4 16 14 15-17 18 4 16 14 15-17 18 4 16 14 15-17 18 4 16 14 15-17 18 4 16 14 15-17 18 4 16 14 15-17 18 4 16 14 15-17 18 4 16 14 15-17 18 4 16 14 15-17 18 4 16
131 CPI CPI CFP CEMT-PI Cefetamet pivoxil DIN X 225 10ug X Cephems-Oral Cephalosporin CEPH-ORAL 05a 19 20-25 26 1 8
132 CCL CET CCL Cefetecol (Cefcatacol) 226 X Cephems Cephalosporin IV CEPH4 04d
133 CZL CZL CZL Cefetrizole 227 X Cephems Cephalosporin-new CEPH? 04e
134 CFS SLD CFS CFS CFS Cefsulodin SFM,DIN X X 73 30ug X Cephems Cephalosporin III CEPH3 04c Cefsulodin 18892-0 129-7 128-9 130-5 127-1 14 15-27 28 13 14-21 22 8 64 18 19-28 29 4 32
135 CSU CSU CSU CSM Cefsumide 240 X Cephems Cephalosporin-new CEPH? 04e
136 CPT CPT Ceftaroline CLSI X 475 30ug X Cephems Cephalosporin CEPH 04b X 73605-8 73650-4 73627-2 19 20-22 23 .5 2 19 20-22 23 .5 2 19 20-22 23 .5 2 19 20-22 23 .5 2 19 20-22 23 .5 2 19 20-22 23 .5 2 19 20-22 23 .5 2
137 CPT CPT Ceftaroline EUCAST X 507 5ug Cephems Cephalosporin CEPH 04b 73605-8 73650-4 73627-2
138 CPA CPA Ceftaroline/Avibactam CLSI X 497 30/15ug X Beta-lactam+Inhibitors BL+INH 03 X 73604-1 73649-6 73626-4
16 BAC BA4 B BTC BC Bacitracin zinc NEO X 336 40units Polypeptides POLYPEP 26 X Bacitracin 18870-6 10868-8 6827-0 6983-1 12 13-21 22 2 4
144 CZX ZOX CZX CZX CZX Ceftizoxime CLSI,SFM,BSAC X X X 19 30ug X Cephems Cephalosporin III CEPH3 04c X Ceftizoxim 18894-6 138-8 137-0 6997-1 20378-6 23622-4 139-6 136-2 21 22-24 25 1 4 21 22-24 25 1 4 21 22-24 25 1 4 21 22-24 25 1 4 21 22-24 25 1 4 21 22-24 25 1 4 21 22-24 25 1 4 21 22-24 25 1 4 21 22-24 25 1 4 21 22-24 25 1 4 14 15-20 21 4 64 2 16 29 - 30 1 2
139 CAZ CAZ CAZ CAZ CAZ Ceftazidime CLSI,SFM,SRGA,BSAC X X X X X 18 30ug X Cephems Cephalosporin III CEPH3 04c X Ceftazidim 18893-8 134-7 133-9 6995-5 135-4 132-1 17 18-20 21 4 16 17 18-20 21 4 16 17 18-20 21 4 16 17 18-20 21 4 16 17 18-20 21 4 16 17 18-20 21 4 16 17 18-20 21 4 16 17 18-20 21 4 16 17 18-20 21 4 16 17 18-20 21 4 16 14 15-27 28 14 15-20 21 4 64 4 32 4 32 19 20-25 26 2 16 23 24-26 27 2 8 27 - 28 2 4
140 CAZ CA1 CAZ CAZ CAZ Ceftazidime EUCAST X X 241 10ug X Cephems Cephalosporin III CEPH3 04c X Ceftazidim 18893-8 134-7 133-9 6995-5 135-4 132-1 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 14 15-29 20 1 16 4 64 10 11-15 16 4 32 4 32 2 16 2 8 2 4
141 CZA CZA Ceftazidime/Avibactam CLSI X 498 30/20ug X Beta-lactam+Inhibitors BL+INH 03 X 73603-3 73648-8 73625-6 20 21 8 16 20 21 8 16
142 TIO TIO CFL Ceftiofur CLSI X 154 30ug X Cephems Cephalosporin III CEPH3 04c X Ceftiofur 23709-9 35780-6 35781-4 17 18-20 21 2 8 17 18-20 21 2 8 17 18-20 21 2 8 17 18-20 21 2 8 17 18-20 21 2 8 17 18-20 21 2 8 17 18-20 21 2 8 17 18-20 21 2 8 17 18-20 21 2 8 17 18-20 21 2 8
143 CZX ZO5 CZX CZX CZX Ceftizoxime DIN X 244 5ug X Cephems Cephalosporin III CEPH3 04c X Ceftizoxim 18894-6 138-8 137-0 6997-1 20378-6 23622-4 139-6 136-2 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 4 64 11 12-16 17 2 16 1 2
145 BPR BPR Ceftobiprole CLSI X 474 30ug X Cephems Cephalosporin CEPH 04e X Ceftobipro 43272-4 43269-0 43271-6 43270-8
146 CZT CZT Ceftolozane/Tazobactam CLSI,EUCAST X X 506 30/10ug X Beta-lactam+Inhibitors BL+INH X 73602-5 73647-0 73624-9 17 18-20 21 2 8 17 18-20 21 2 8 2 8 2 8
147 CCV CCV CAZ-CVA Ceftazidime/Clavulanic acid CLSI X 242 30/4ug X Beta-lactam+Inhibitors BL+INH 03 X Ceftazidim 35776-4 35774-9 35775-6 42352-5
148 CEM CEM CEM CFM Cefteram 243 X Cephems Cephalosporin II CEPH2 04b
149 CPL CPL CFTM-PI Cefteram pivoxil 449 X Cephems-Oral Cephalosporin CEPH-ORAL 05a
23 CEC CF1 CEC CEC CCL Cefaclor SFM X 185 10ug X Cephems-Oral Cephalosporin CEPH-ORAL 05a X Cefaclor 18874-8 85-1 84-4 6986-4 86-9 83-6 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 15 16-21 22 2 16 1 8 4 32 1 16 1 2
154 CXM FR5 CXM CXM CXM Cefuroxime BSAC X 312 5ug X Cephems Cephalosporin II CEPH2 04b X Cefuroxime 18896-1 146-1 145-3 6999-7 147-9 144-6 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 64 4 16 4 32 2 16 8 16 1 32
155 AMK AK4 AN AMK AMK Amikacin NEO X 329 40ug Aminoglycosides AG 09 X Amikacin 18860-7 13-3 12-5 6975-7 20373-7 23624-0 14-1 11-7 16 64 16 64 16 64 16 64 16 64 16 64 16 64 16 64 16 64 16 64 14 15-25 26 8 32 4 32 4 32 4 8 4 8
156 CXM FRX CXM CXM CXM Cefuroxime CLSI,EUCAST X X X X X X X 21 30ug X Cephems Cephalosporin II CEPH2 04b X Cefuroxime 18896-1 146-1 145-3 6999-7 147-9 144-6 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 17 - 18 8 16 14 15-21 22 8 64 4 16 4 32 19 20-28 29 2 16 15 16-18 19 8 16 17 18-24 25 1 32
157 CXM FR6 CXM CXM CXM Cefuroxime NEO X 343 60ug X Cephems Cephalosporin II CEPH2 04b X Cefuroxime 18896-1 146-1 145-3 6999-7 147-9 144-6 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 14 15-27 28 8 64 4 16 4 32 2 16 8 16 1 32
158 CXA FRA CFA CXM-AX Cefuroxime axetil CLSI,EUCAST X X X X 22 30ug X Cephems-Oral Cephalosporin CEPH-ORAL 05a X Cefuroxime 35783-0 35782-2 20460-2 14 15-22 23 4 32 14 15-22 23 4 32 14 15-22 23 4 32 14 15-22 23 4 32 14 15-22 23 4 32 14 15-22 23 4 32 14 15-22 23 4 32 14 15-22 23 4 32 14 15-22 23 4 32 14 15-22 23 4 32 17 - 18 8 16 1 8 1 8 1 32 24 25-28 29 1 4 24 - 25 1 2
159 CXA FR1 CFA CXM-AX Cefuroxime axetil SFM X 190 10ug X Cephems-Oral Cephalosporin CEPH-ORAL 05a X Cefuroxime 35783-0 35782-2 20460-2 4 32 4 32 4 32 4 32 4 32 4 32 4 32 4 32 4 32 4 32 19 20-25 26 1 8 1 8 1 32 1 4 1 2
160 ZON ZON CFZ Cefuzonam 155 X Cephems Cephamycin CEPHAM 04e
161 LEX LEX CN CEX CEX Cephalexin EUCAST X X X X 121 30ug X Cephems-Oral Cephalosporin CEPH-ORAL 05a X Cephalexin 18897-9 150-3 149-5 35784-8 151-1 148-7 16 32 11 12-17 18 8 64 20 21-31 32 13 14-26 27 1 16 24 - 25 2 4
162 CEP KE6 CF CTN CET Cephalothin NEO X 344 66ug X Cephems Cephalosporin I CEPH1 04a X Cephalothi 18900-1 162-8 161-0 7000-3 163-6 160-2 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 14 15-27 28 8 64 4 32 2 16 1 16 1 2
163 CEP KEF CF CTN CET Cephalothin CLSI,EUCAST X X X X X 23 30ug X Cephems Cephalosporin I CEPH1 04a X Cephalothi 18900-1 162-8 161-0 7000-3 163-6 160-2 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 11 12-17 18 8 64 4 32 17 18-26 27 2 16 13 14-26 27 1 16 26 - 27 1 2
164 HAP FAP CP CAP Cephapirin SFM 150 30ug X Cephems Cephalosporin I CEPH1 04a Cephapirin 18901-9 166-9 165-1 167-7 164-4
165 GEH GE2 Gentamicin-High BSAC X 318 200ug Aminoglycosides AG 09 X Gentamicin 18929-0 7017-7 7018-5 35817-6 500 501 500 501 500 501 500 501 500 501 500 501 500 501 500 501 500 501 500 501 250 501 500 1000
166 GEH GEH Gentamicin-High CLSI X 137 120ug Aminoglycosides AG 09 X Gentamicin 18929-0 7017-7 7018-5 35817-6 6 7-9 10 512 513 6 7-9 10 512 513 6 7-9 10 512 513 6 7-9 10 512 513 6 7-9 10 512 513 6 7-9 10 512 513 6 7-9 10 512 513 6 7-9 10 512 513 6 7-9 10 512 513 6 7-9 10 512 513 250 501 500 1000
167 GEH G30 Gentamicin-High EUCAST X 488 30ug Aminoglycosides AG 09 X Gentamicin 18929-0 7017-7 7018-5 35817-6 512 513 512 513 512 513 512 513 512 513 512 513 512 513 512 513 512 513 512 513 250 501 500 1000
168 GRX GRE GRE GPFX Grepafloxacin CLSI X 141 5ug Quinolones Fluoroquinolone FQ 11b X Grepafloxa 23638-0 35818-4 23639-8 21316-5 14 15-17 18 1 4 14 15-17 18 1 4 14 15-17 18 1 4 14 15-17 18 1 4 14 15-17 18 1 4 14 15-17 18 1 4 14 15-17 18 1 4 14 15-17 18 1 4 14 15-17 18 1 4 14 15-17 18 1 4
169 GRI GRI GRI GRF Griseofulvin NEO X 257 25ug Antifungals FUNG 29
170 HAB HAB HAB Habekacin 258 Aminoglycosides AG 09
171 CLO CLX CX MCIPC Cloxacillin 122 5ug X Penicillins Penicillin (Stable) PEN-S 01e Cloxacilli 18910-0 198-2 197-4 199-0 196-6 4 8
172 FOX FO6 FOX COX CFX Cefoxitin NEO X 342 60ug X Cephems Cephamycin CEPHAM 04e X Cefoxitin 18888-8 117-2 116-4 6991-4 25366-6 118-0 115-6 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 14 15-27 28 8 64 4 16 4 32 2 16 4 16 4 8
173 FOX FOX FOX COX CFX Cefoxitin 439 10ug X Cephems Cephamycin CEPHAM 04e X Cefoxitin 18888-8 117-2 116-4 6991-4 25366-6 118-0 115-6 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32
174 ZOP ZOP COP CZOP Cefozopran 156 X Cephems-Oral Cephalosporin CEPH-ORAL 05a
175 CFZ MIZ CFZ CMZ Cefpimizole 236 X Cephems Cephalosporin III CEPH3 04c
176 CPM CPM CPM CPM Cefpiramide 237 X Cephems Cephalosporin III CEPH3 04c
177 CPO PIR CPO CPI CPR Cefpirome SFM,SRGA,NEO,SFM X X X 72 30ug X Cephems Cephalosporin III CEPH3 04c Cefpirome 18889-6 8276-8 8275-0 6992-2 6650-6 8274-3 14 15-27 28 14 15-20 21 4 64 2 16 23 24-26 27 .5 2 1 2
178 CPO PI2 CPO CPI CPR Cefpirome BSAC X 310 20ug X Cephems Cephalosporin III CEPH3 04c Cefpirome 18889-6 8276-8 8275-0 6992-2 6650-6 8274-3 4 64 2 16 .5 2 24 - 25 1 2
179 COL CO1 CS COL CL Colistin NEO X 349 150ug Lipopeptides LIPOPEP 16 X Colistin 18912-6 206-3 205-5 33333-6 207-1 204-8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 12 13-21 22 2 4 0.5 4 4 8
180 COL COL CS COL CL Colistin CLSI,EUCAST X X 28 10ug Lipopeptides LIPOPEP 16 X Colistin 18912-6 206-3 205-5 33333-6 207-1 204-8 10 - 11 2 8 10 - 11 2 8 10 - 11 2 8 10 - 11 2 8 10 - 11 2 8 10 - 11 2 8 10 - 11 2 8 10 - 11 2 8 10 - 11 2 8 10 - 11 2 8 2 4 2 4 0.5 4 4 8
181 COL CO5 CS COL CL Colistin SFM X 194 50ug Lipopeptides LIPOPEP 16 X Colistin 18912-6 206-3 205-5 33333-6 207-1 204-8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 14 - 15 2 4 0.5 4 4 8
182 COL CO2 CS COL CL Colistin BSAC X 315 25ug Lipopeptides LIPOPEP 16 X Colistin 18912-6 206-3 205-5 33333-6 207-1 204-8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 4 0.5 4 14 - 15 4 8
183 CYC CYC CSE CS Cycloserine 129 Antimycobacterials MYCO 28 Cycloserin 18914-2 214-7 213-9 23608-3 215-4 212-1
184 DAL DAL Dalbavancin CLSI,EUCAST X X 467 Glycopeptides Lipoglycopeptide GLYCO 21b X Dalbavanci 41734-5 41688-3 41689-1 41690-9
185 DAN DFX DFX DAN Danofloxacin CLSI X 247 5ug Quinolones Fluoroquinolone FQ 11b X 73601-7 73646-2 73623-1
186 DAP DAP DPT Daptomycin CLSI X 395 30ug Lipopeptides LIPOPEP 16 X Daptomycin 35789-7 35787-1 35788-9 41691-7 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 -
187 DEM DEM DM DMCTC Demeclocycline 160 Tetracyclines TETRA 24 Demeclocyc 18915-9 218-8 217-0 7006-0 219-6 216-2
188 DKB DIB DKB DIB DKB Dibekacin SFM X 29 10ug Aminoglycosides AG 09 13 14-15 16 4 16
189 DIC DIC DX DIC MDIPC Dicloxacillin DIN X 123 5ug X Penicillins Penicillin (Stable) PEN-S 01e Dicloxacil 18916-7 222-0 221-2 223-8 220-4 1 2
190 DIF DIF DIF Difloxacin CLSI X 248 10ug Quinolones Fluoroquinolone FQ 11b X Difloxacin 35792-1 35790-5 35791-3 17 18-20 21 .5 4 17 18-20 21 .5 4 17 18-20 21 .5 4 17 18-20 21 .5 4 17 18-20 21 .5 4 17 18-20 21 .5 4 17 18-20 21 .5 4 17 18-20 21 .5 4 17 18-20 21 .5 4 17 18-20 21 .5 4
191 DIR DIR DIR Dirithromycin CLSI,SFM X X 104 15ug Macrolides MACRO 17a X Dirithromy 35795-4 35793-9 35794-7 7007-8 15 16-18 19 2 8 15 16-18 19 2 8 15 16-18 19 2 8 15 16-18 19 2 8 15 16-18 19 2 8 15 16-18 19 2 8 15 16-18 19 2 8 15 16-18 19 2 8 15 16-18 19 2 8 15 16-18 19 2 8 15 16-27 28 .125 8
192 CPD PO3 CPD CPO CPDX Cefpodoxime SRGA,NEO X X 188 30ug X Cephems-Oral Cephalosporin CEPH-ORAL 05a X Cefpodoxim 18890-4 121-4 120-6 6993-0 122-2 119-8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 1 4 23 24-26 27 1 4 1 2
193 CPD POD CPD CPO CPDX Cefpodoxime CLSI,EUCAST X X X 87 10ug X Cephems-Oral Cephalosporin CEPH-ORAL 05a X Cefpodoxim 18890-4 121-4 120-6 6993-0 122-2 119-8 17 18-20 21 2 8 17 18-20 21 2 8 17 18-20 21 2 8 17 18-20 21 2 8 17 18-20 21 2 8 17 18-20 21 2 8 17 18-20 21 2 8 17 18-20 21 2 8 17 18-20 21 2 8 17 18-20 21 2 8 20 - 21 1 2 20 21-23 24 1 4 1 4 1 2
194 CPX CPX CPP CPDX-PR Cefpodoxime proxetil SFM,DIN X X 238 10ug X Cephems-Oral Cephalosporin CEPH-ORAL 05a 20 21-23 24 1 4 18 19-24 25 1 8
195 CDC CDC CPDX-CVA Cefpodoxime/Clavulanic acid 429 X Beta-lactam+Inhibitors BL+INH 03 Cefpodoxim 41731-1 41680-0 41679-2 41678-4
196 CPR PRO CPR CPY Cefprozil CLSI X 102 30ug X Cephems-Oral Cephalosporin CEPH-ORAL 05a X Cefprozil 18891-2 125-5 124-8 6994-8 126-3 123-0 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32
197 CEQ CEQ Cefquinome 481 X Cephems Cephalosporin ? CEPH? 04d
198 CRD CRD CRD CXD Cefroxadine 239 X Cephems Cephalosporin I CEPH1 04a
199 DOR DOR DRPM Doripenem CLSI,EUCAST X X 451 10ug X Penems Carbapenems CARB 07a X Doripenem 60535-2 72893-1 56031-8 58711-3 19 20-22 23 1 4 19 20-22 23 1 4 19 20-22 23 1 4 19 20-22 23 1 4 19 20-22 23 1 4 19 20-22 23 1 4 19 20-22 23 1 4 19 20-22 23 1 4 19 20-22 23 1 4 17 18-23 24 1 8
200 DOX DOX DO DOX DOXY Doxycycline CLSI,SFM,SRGA,BSAC X X X X X 30 30ug Tetracyclines TETRA 24a X Doxycyclin 18917-5 226-1 225-3 7008-6 20379-4 23623-2 227-9 224-6 10 11-13 14 4 16 10 11-13 14 4 16 10 11-13 14 4 16 10 11-13 14 4 16 10 11-13 14 4 16 10 11-13 14 4 16 10 11-13 14 4 16 10 11-13 14 4 16 10 11-13 14 4 16 10 11-13 14 4 16 16 17-18 19 4 16 1 8 19 20-24 25 1 4 19 20-22 23 1 2 28 - 29 1 2
201 DOX DO8 DO DOX DOXY Doxycycline NEO X 350 80ug Tetracyclines TETRA 24 X Doxycyclin 18917-5 226-1 225-3 7008-6 20379-4 23623-2 227-9 224-6 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 1 8 1 4 1 2 1 2
202 ECO ECO ECO Econazole NEO X 351 10ug Antifungals FUNG 29 Econazole 25595-0 25637-0
203 ENX EN5 ENX ENO ENX Enoxacin SFM,DIN X X 249 5ug Quinolones Fluoroquinolone FQ 11b X Enoxacin 18918-3 230-3 229-5 41692-5 231-1 228-7 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 18 19-21 22 1 4 16 17-20 21 1 4
204 ENX ENX ENX ENO ENX Enoxacin CLSI X 31 10ug Quinolones Fluoroquinolone FQ 11b X Enoxacin 18918-3 230-3 229-5 41692-5 231-1 228-7 14 15-17 18 2 8 14 15-17 18 2 8 14 15-17 18 2 8 14 15-17 18 2 8 14 15-17 18 2 8 14 15-17 18 2 8 14 15-17 18 2 8 14 15-17 18 2 8 14 15-17 18 2 8 14 15-17 18 2 8 1 4 1 4
205 GRN GRN Garenoxacin CLSI X 491 5ug Quinolones Quinolone QUIN 11a X Garenoxaci 35813-5 35811-9 35812-7
206 GAT GA2 GAT GFLX Gatifloxacin 412 2ug Quinolones Fluoroquinolone FQ 11b X Gatifloxac 31038-3 31040-9 31036-7 31042-5 41494-6 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 1 4 1 4 1 2
207 GAT GAT GAT GFLX Gatifloxacin CLSI,SFM,DIN X X X 256 5ug Quinolones Fluoroquinolone FQ 11b X Gatifloxac 31038-3 31040-9 31036-7 31042-5 41494-6 14 15-17 18 2 8 14 15-17 18 2 8 14 15-17 18 2 8 14 15-17 18 2 8 14 15-17 18 2 8 14 15-17 18 2 8 14 15-17 18 2 8 14 15-17 18 2 8 14 15-17 18 2 8 14 15-17 18 2 8 17 18-20 21 1 4 17 18-22 23 1 4 1 2
208 GEM GEM GEM Gemifloxacin CLSI X 393 5ug Quinolones Fluoroquinolone FQ 11b X Gemifloxac 35816-8 35814-3 35815-0 41697-4 15 16-19 20 .25 1 15 16-19 20 .25 1 15 16-19 20 .25 1 15 16-19 20 .25 1 15 16-19 20 .25 1 15 16-19 20 .25 1 15 16-19 20 .25 1 15 16-19 20 .25 1 15 16-19 20 .25 1 15 16-19 20 .25 1 1 2
209 GEM GX1 GEM Gemifloxacin X 413 1ug Quinolones Fluoroquinolone FQ 11b X Gemifloxac 35816-8 35814-3 35815-0 41697-4 .25 1 .25 1 .25 1 .25 1 .25 1 .25 1 .25 1 .25 1 .25 1 .25 1 19 - 20 1 2
210 GEN GE1 GM GEN GM Gentamicin SFM X 196 15ug Aminoglycosides AG 09 X Gentamicin 18928-2 268-3 267-5 7016-9 269-1 266-7 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 15 16-17 18 2 8 1 8 1 8 2 8 2 4 1 2
211 JOS JOS JM JOS JM Josamycin 115 100ug Macrolides MACRO 17 Josamycine 25597-6 41698-2 25702-2 41699-0
212 GEN GEN GM GEN GM Gentamicin CLSI,EUCAST X X X X 35 10ug Aminoglycosides AG 09 X Gentamicin 18928-2 268-3 267-5 7016-9 269-1 266-7 12 13-14 15 4 16 12 13-14 15 4 16 12 13-14 15 4 16 12 13-14 15 4 16 12 13-14 15 4 16 12 13-14 15 4 16 12 13-14 15 4 16 12 13-14 15 4 16 12 13-14 15 4 16 12 13-14 15 4 16 13 14-16 17 2 8 4 16 14 15-20 21 1 8 1 8 2 8 2 4 19 - 20 1 2
213 GEN GE4 GM GEN GM Gentamicin NEO X 358 40ug Aminoglycosides AG 09 X Gentamicin 18928-2 268-3 267-5 7016-9 269-1 266-7 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 14 15-25 26 4 16 1 8 1 8 2 8 2 4 1 2
214 GEN GE3 GM GEN GM Gentamicin AFA,SRGA X X 197 30ug Aminoglycosides AG 09 X Gentamicin 18928-2 268-3 267-5 7016-9 269-1 266-7 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 1 8 1 8 18 19-21 22 2 8 17 18-20 21 2 4 1 2
215 GEH GH2 Gentamicin-High NEO X 359 250ug Aminoglycosides AG 09 X Gentamicin 18929-0 7017-7 7018-5 35817-6 500 501 500 501 500 501 500 501 500 501 500 501 500 501 500 501 500 501 500 501 250 501 500 1000
216 GEH GE5 Gentamicin-High SFM X 198 500ug Aminoglycosides AG 09 X Gentamicin 18929-0 7017-7 7018-5 35817-6 500 501 500 501 500 501 500 501 500 501 500 501 500 501 500 501 500 501 500 501 10 11-16 17 250 501 500 1000
217 HET HET H Hetacillin 259 X Penicillins Aminopenicillin PEN 01b Hetacillin 18931-6 276-6 275-8 277-4 274-1
218 HYG HYG Hygromycin 414 Aminoglycosides AG 09
219 ICL ICL Iclaprim CLSI X 476 5ug Folate pathway inhibitors FOLATE 12a X 73597-7 73642-1 73619-9
220 IPM IMP IPM IMP Imipenem CLSI,EUCAST X X X X X X X 36 10ug X Penems Carbapenems CARB 07a X Imipenem 18932-4 280-8 279-0 7019-3 23613-3 281-6 278-2 19 20-22 23 1 4 19 20-22 23 1 4 19 20-22 23 1 4 19 20-22 23 1 4 19 20-22 23 1 4 19 20-22 23 1 4 19 20-22 23 1 4 19 20-22 23 1 4 19 20-22 23 1 4 13 14-15 16 4 16 14 15-20 21 2 16 16 17-21 22 4 16 19 20-22 23 2 8 2 16 22 23-25 26 4 16 16 17-22 23 1 16 22 - 23 4 8
221 IPM IM1 IPM IMP IPM/CS Imipenem NEO X 360 15ug X Penems Carbapenems CARB 07a X Imipenem 18932-4 280-8 279-0 7019-3 23613-3 281-6 278-2 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 12 13-25 26 4 16 4 16 4 8
222 IPE IPE Imipenem/EDTA 433 X Penems Carbapenems CARB 07a 35819-2
223 ISE ISE ISP ISE ISP Isepamicin SFM X 75 30ug Aminoglycosides AG 09 Isepamicin 32381-6 35820-0 35821-8 14 15-16 17 8 32
224 ISO ISO ISL Isoconazole NEO X 165 10ug Antifungals FUNG 29
225 INH INH INH INH Isoniazid 132 Antimycobacterials MYCO 28 Isoniazid 18934-0 288-1 287-3 7020-1 20383-6 23947-5 289-9 286-5
227 ENR EN1 ENR Enrofloxacin NEO X 352 10ug Quinolones Fluoroquinolone FQ 11b Enrofloxac 23712-3 35797-0 35798-8 35796-2 .25 2 .25 2 .25 2 .25 2 .25 2 .25 2 .25 2 .25 2 .25 2 .25 2
228 ENR ENR ENR Enrofloxacin CLSI X 161 5ug Quinolones Fluoroquinolone FQ 11b X Enrofloxac 23712-3 35797-0 35798-8 35796-2 16 17-22 23 .25 2 16 17-22 23 .25 2 16 17-22 23 .25 2 16 17-22 23 .25 2 16 17-22 23 .25 2 16 17-22 23 .25 2 16 17-22 23 .25 2 16 17-22 23 .25 2 16 17-22 23 .25 2 16 17-22 23 .25 2
229 ENV ENV EVM Enviomycin (Tuberactinomycin) 452 Antimycobacterials MYCO 28
230 EPE EPE Eperozolid 250 Oxazolidinones OXAZOLID 20
231 EPP EPP EPP Epiroprim 251 Folate pathway inhibitors FOLATE 12a
232 ETP ETP ERT Ertapenem CLSI,EUCAST X X X 401 10ug X Penems Carbapenems CARB 07a X Ertapenem 35802-8 35799-6 35801-0 35800-2 18 19-21 22 .5 2 18 19-21 22 .5 2 18 19-21 22 .5 2 18 19-21 22 .5 2 18 19-21 22 .5 2 18 19-21 22 .5 2 18 19-21 22 .5 2 18 19-21 22 .5 2 19 20-22 23 .25 1 15 16-18 19 2 8 21 22-24 25 0.5 2 19 20-22 23 2 8
233 ERY ER5 E ERY EM Erythromycin BSAC X 316 5ug Macrolides MACRO 17 X Erythromyc 18919-1 234-5 233-7 7009-4 20380-2 23633-1 235-2 232-9 .5 8 .5 8 .5 8 .5 8 .5 8 .5 8 .5 8 .5 8 .5 8 .5 8 1 8 1 8 1 4 1 4 .5 1 19 - 20 .5 1
234 ERY ERY E ERY EM Erythromycin CLSI,EUCAST X X X X X X 32 15ug Macrolides 14-Membered ring MACRO 17a X Erythromyc 18919-1 234-5 233-7 7009-4 20380-2 23633-1 235-2 232-9 13 14-22 23 .5 8 13 14-22 23 .5 8 13 14-22 23 .5 8 13 14-22 23 .5 8 13 14-22 23 .5 8 13 14-22 23 .5 8 13 14-22 23 .5 8 13 14-22 23 .5 8 13 14-22 23 .5 8 13 14-22 23 .5 8 16 17-21 22 1 8 16 17-20 21 1 8 1 4 19 20-23 24 1 4 19 20-24 25 .5 1 .5 1
235 ERY ER7 E ERY EM Erythromycin NEO X 353 78ug Macrolides 14-Membered ring MACRO 17 X Erythromyc 18919-1 234-5 233-7 7009-4 20380-2 23633-1 235-2 232-9 .5 8 .5 8 .5 8 .5 8 .5 8 .5 8 .5 8 .5 8 .5 8 .5 8 14 15-27 28 1 8 1 8 1 4 1 4 .5 1 .5 1
236 ETH ETH EB EMB EB Ethambutol 130 Antimycobacterials MYCO 28 Ethambutol 18921-7 242-8 241-0 7010-2 20381-0 23625-7 243-6 240-2
237 ETI ETI EA ETH ETH Ethionamide 131 Antimycobacterials MYCO 28 Ethionamid 18922-5 41693-3 16099-4 7011-0 20382-8 23617-4
238 ETO ETO Ethopabate 411 Coccidiostats COCC 27
239 FAR FAR FAR FRPM Faropenem CLSI X 428 5ug X Penems Penem PENEM 07b X 73600-9 73645-4 73622-3
240 FDX FDX Fidaxomicin CLSI X 487 17 X 73599-3 73644-7 73621-5
241 FIN FIN Finafloxacin CLSI X 500 Quinolones Fluoroquinolone FQ 11b X 73598-5 73643-9 73620-7
242 FLA FLA Flavomycin 252 Flavophospholipols FLAVO 27
243 FLE FL1 FLE FLO FLRX Fleroxacin NEO X 354 10ug Quinolones Fluoroquinolone FQ 11b X Fleroxacin 32372-5 35806-9 25411-0 7012-8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 1 8
244 FLE FLE FLE FLO FLRX Fleroxacin CLSI,DIN X X 105 5ug Quinolones Fluoroquinolone FQ 11b X Fleroxacin 32372-5 35806-9 25411-0 7012-8 15 16-18 19 2 8 15 16-18 19 2 8 15 16-18 19 2 8 15 16-18 19 2 8 15 16-18 19 2 8 15 16-18 19 2 8 15 16-18 19 2 8 15 16-18 19 2 8 15 16-18 19 2 8 15 16-18 19 2 8 12 13-23 24 14 15-21 22 1 8
245 FLO FLO FLO FLX FMOX Flomoxef 162 X Cephems Oxacephem OXACEPH 04f
246 FLR FLR FLF Florfenicol CLSI X 253 30ug Phenicols PHEN 22 X Florfenico 23740-4 35807-7 35808-5 14 15-18 19 2 8 14 15-18 19 2 8 14 15-18 19 2 8 14 15-18 19 2 8 14 15-18 19 2 8 14 15-18 19 2 8 14 15-18 19 2 8 14 15-18 19 2 8 14 15-18 19 2 8 14 15-18 19 2 8
247 FLC FLC FU FLU Flucloxacillin DIN X 163 X Penicillins Penicillin (Stable) PEN-S 01e 1 2 4 8
248 FLU FL2 FCA FLCZ Fluconazole CLSI,NEO X 443 25ug Antifungals FUNG 29 X Fluconazol 18924-1 250-1 249-3 7013-6 251-9 248-5 14 15-18 19 8 64 14 15-18 19 8 64 14 15-18 19 8 64 14 15-18 19 8 64 14 15-18 19 8 64 14 15-18 19 8 64 14 15-18 19 8 64 14 15-18 19 8 64 14 15-18 19 8 64
250 FLM FLM UB FLM Flumequine SFM X 88 30ug Quinolones Quinolone QUIN 11a 20 21-24 25 4 16
251 FFL FFL F-FLCZ Fosfluconazole 453 Antifungals FUNG 29
252 FOS FO7 FOS FOS FOM Fosfomycin NEO X 355 70ug Fosfomycins Fosfomycin FOSFO 13 X Fosfomycin 25596-8 35810-1 25653-7 35809-3 64 256 64 256 64 256 64 256 64 256 64 256 64 256 64 256 64 256 12 13-17 18 32 64 128 256
253 FOS FO2 FOS FOS FOM Fosfomycin BSAC 317 20ug Fosfomycins Fosfomycin FOSFO 13 X Fosfomycin 25596-8 35810-1 25653-7 35809-3 64 256 64 256 64 256 64 256 64 256 64 256 64 256 64 256 64 256 32 64 128 256
254 FOS FOS FOS FOS FOM Fosfomycin CLSI,EUCAST X X X 254 200ug Fosfomycins Fosfomycin FOSFO 13 X Fosfomycin 25596-8 35810-1 25653-7 35809-3 12 13-15 16 64 256 12 13-15 16 64 256 12 13-15 16 64 256 12 13-15 16 64 256 12 13-15 16 64 256 12 13-15 16 64 256 12 13-15 16 64 256 12 13-15 16 64 256 12 13-15 16 64 256 32 64 32 64 19 - 20 128 256
255 FOS FO5 FOS FOS FOM Fosfomycin SFM X 33 50ug Fosfomycins Fosfomycin FOSFO 13 X Fosfomycin 25596-8 35810-1 25653-7 35809-3 64 256 64 256 64 256 64 256 64 256 64 256 64 256 64 256 64 256 13 - 14 32 64 128 256
256 FMD FMD FMD Fosmidomycin 255 Fosfomycins Fosfomycin FOSFO 13
257 FRM FRM FY FRA Framycetin 164 30ug Aminoglycosides AG 09 Framycetin 18926-6 259-2 258-4 260-0 257-6
258 FRZ FRZ FUR Furazolidone 434 100ug Nitrofurans FURAN 18
259 FRZ FRZ FUR Furazolidone NEO X 356 50ug Nitrofurans FURAN 18
260 FUS FU5 FA FUS FA Fusidic acid AFA,SRGA X X 195 50ug Steroidals Fusidane FUSID 26 X Fusidate 18927-4 263-4 262-6 7015-1 264-2 261-8 2 32 1 2 32 - 33 .5 1 26 27-29 30 .5 1 1 2
261 FUS FUS FA FUS FA Fusidic acid EUCAST X X X X 34 10ug Steroidals Fusidane FUSID 26 X Fusidate 18927-4 263-4 262-6 7015-1 264-2 261-8 14 15-21 22 2 32 1 2 .5 1 .5 1 29 - 30 1 2
262 FUS F00 FA FUS FA Fusidic acid NEO X 357 100ug Steroidals Fusidane FUSID 26 X Fusidate 18927-4 263-4 262-6 7015-1 264-2 261-8 14 15-27 28 2 32 1 2 .5 1 .5 1 1 2
263 KAN KAN K KAN KM Kanamycin CLSI,SFM X X 37 30ug Aminoglycosides AG 09 X Kanamycin 18935-7 292-3 291-5 7022-7 23609-1 293-1 290-7 13 14-17 18 16 64 13 14-17 18 16 64 13 14-17 18 16 64 13 14-17 18 16 64 13 14-17 18 16 64 13 14-17 18 16 64 13 14-17 18 16 64 13 14-17 18 16 64 13 14-17 18 16 64 13 14-17 18 16 64 14 15-16 17 8 32 4 32
264 KAN KA1 K KM Kanamycin NEO X 361 100ug Aminoglycosides AG 09 X Kanamycin 18935-7 292-3 291-5 7022-7 23609-1 293-1 290-7 16 64 16 64 16 64 16 64 16 64 16 64 16 64 16 64 16 64 16 64 14 15-27 28 8 32 4 32
265 KAH KAH Kanamycin-High CLSI,SFM X X 138 1000ug Aminoglycosides AG 09 X Kanamycin. 18936-5 7023-5 7024-3 9 10-13 14 250 501
266 KAH KH5 Kanamycin-High NEO X 362 500ug Aminoglycosides AG 09 X Kanamycin. 18936-5 7023-5 7024-3 250 501
267 KET KET KET KCZ Ketoconazole NEO X 134 15ug Antifungals FUNG 29 Ketoconazo 18937-3 296-4 295-6 7025-0 297-2 294-9
268 KIT KIT LU LM Kitasamycin (Leucomycin) 116 Macrolides MACRO 17
269 LAS LAS Lasalocid 415 Combinations Coccidiostat/Ionophore OTHER 28
270 LEN LEN LEN LAPC Lenampicillin 454 X Penicillins Aminopenicillin PEN 01b
271 LVX LEV LEV LVFX Levofloxacin CLSI,EUCAST X X X X X 142 5ug Quinolones Fluoroquinolone FQ 11b X Levofloxac 20629-2 21367-8 20396-8 7026-8 16 17-20 21 0.5 2 13 14-16 17 2 8 13 14-16 17 2 8 13 14-16 17 2 8 13 14-16 17 2 8 13 14-16 17 2 8 13 14-16 17 2 8 13 14-16 17 2 8 13 14-16 17 2 8 13 14-16 17 2 8 18 19-21 22 1 4 16 17-19 20 1 4 2 4 2 4
272 LVX LE1 LEV LVFX Levofloxacin BSAC X 319 1ug Quinolones Fluoroquinolone FQ 11b X Levofloxac 20629-2 21367-8 20396-8 7026-8 0.5 2 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 1 8 2 4 19 - 20 2 4
273 LIN LIN L LIN LCM Lincomycin AFA,SFM X X 38 15ug Lincosamides LINCO 15 Lincomycin 18938-1 300-4 299-8 41700-6 301-2 298-0 16 17-20 21 2 16 17 18-23 24 1 4
274 LIN LI1 L LIN LCM Lincomycin NEO X 363 19ug Lincosamides LINCO 15 Lincomycin 18938-1 300-4 299-8 41700-6 301-2 298-0 14 15-27 28 2 16 1 4
275 LSP LSP Linco-spectin (lincomycin/spectinomycin) NEO X 364 15/200ug Combinations Lincosamide/Aminocyclitol OTHER 28
276 LNZ LNZ LIZ LZD Linezolid CLSI,SFM X X 260 30ug Oxazolidinones OXAZOLID 20 X Linezolid 29258-1 29255-7 29254-0 33332-8 41500-0 20 - 21 4 8 20 - 21 4 8 20 - 21 4 8 20 - 21 4 8 20 - 21 4 8 20 - 21 4 8 20 - 21 4 8 20 - 21 4 8 20 - 21 4 8 20 - 21 4 8 23 24-27 28 2 8 2 4
277 LNZ LN1 LIZ LZD Linezolid EUCAST X X 416 10ug Oxazolidinones OXAZOLID 20 X Linezolid 29258-1 29255-7 29254-0 33332-8 41500-0 4 8 4 8 4 8 4 8 4 8 4 8 4 8 4 8 4 8 4 8 2 8 22 - 23 2 4
278 LFE LFE Linoprist-flopristin CLSI X 483 10ug Streptogramins STREPTOG 23 X 55292-7 55294-3 55293-5
279 LOM LOM LOM LOM LFLX Lomefloxacin CLSI X 107 10ug Quinolones Fluoroquinolone FQ 11b X Lomefloxac 18939-9 304-6 303-8 41701-4 305-3 302-0 18 19-21 22 2 8 18 19-21 22 2 8 18 19-21 22 2 8 18 19-21 22 2 8 18 19-21 22 2 8 18 19-21 22 2 8 18 19-21 22 2 8 18 19-21 22 2 8 18 19-21 22 2 8 18 19-21 22 2 8 1 4
280 LOM LO5 LOM LOM LFLX Lomefloxacin SFM X 261 5ug Quinolones Fluoroquinolone FQ 11b X Lomefloxac 18939-9 304-6 303-8 41701-4 305-3 302-0 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 18 19-21 22 1 4
281 LOR LOR LOR LCBF Loracarbef CLSI,DIN X X 108 30ug X Cephems-Oral Carbacephem CEPH-ORAL 05b X Loracarbef 18940-7 308-7 307-9 7027-6 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 14 15-17 18 8 32 2 16 20 21-25 26 2 16 19 20-22 23 2 8
282 LOR LO1 LOR LCBF Loracarbef SFM X 262 10ug X Cephems-Oral Cephalosporin CEPH-ORAL 05a Loracarbef 18940-7 308-7 307-9 7027-6 309-5 306-1 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 14 15-22 23 2 16 2 16 2 8
283 MAR MAR MAR Marbofloxacin CLSI X 468 5ug Quinolones Fluoroquinolone FQ 11b X 73596-9 73641-3 73618-1 14 15-19 20 1 4 14 15-19 20 1 4 14 15-19 20 1 4 14 15-19 20 1 4 14 15-19 20 1 4
284 MEC ME4 MEC MCL Mecillinam (Amdinocillin) NEO X 365 33ug X Penicillins Amidinopenicillin PEN 01f X Amdinocill 18859-9 9-1 8-3 7028-4 10-9 7-5 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 14 15-27 28 2 16 1 16 1 16 1 16
285 MEC MEC MEC MCL Mecillinam (Amdinocillin) CLSI,EUCAST X X X X X X 80 10ug X Penicillins Amidinopenicillin PEN 01f X Amdinocill 18859-9 9-1 8-3 7028-4 10-9 7-5 11 12-14 15 8 32 11 12-14 15 8 32 11 12-14 15 8 32 11 12-14 15 8 32 11 12-14 15 8 32 11 12-14 15 8 32 11 12-14 15 8 32 11 12-14 15 8 32 11 12-14 15 8 32 11 12-14 15 8 32 14 - 15 8 16 17 18-21 22 2 16 14 15-23 24 1 16 13 14-23 24 1 16 13 14-23 24 1 16
286 MEL MEL Meleumycin 117 Macrolides MACRO 17
287 MEM MER MEM MER MEPM Meropenem CLSI,EUCAST X X X X X X X 109 10ug X Penems Carbapenems CARB 07a X Meropenem 18943-1 6653-0 6652-2 7029-2 6654-8 6651-4 19 20-22 23 1 4 19 20-22 23 1 4 19 20-22 23 1 4 19 20-22 23 1 4 19 20-22 23 1 4 19 20-22 23 1 4 19 20-22 23 1 4 19 20-22 23 1 4 19 20-22 23 1 4 13 14-15 16 4 16 15 16-21 22 2 16 16 17-19 20 14 15-19 20 4 16 13 14-21 22 2 16 16 17-22 23 4 16 19 20-28 29 .125 16 22 - 23 4 8
288 MES MES MES Mesulfamide 263 Folate pathway inhibitors FOLATE 12a 4 8
289 MET MET ME MET Methicillin CLSI,BSAC X X 39 5ug X Penicillins Penicillin (Stable) PEN-S 01e X Methicilli 18945-6 324-4 323-6 7030-0 325-1 322-8 9 10-13 14 8 16 9 10-13 14 8 16 9 10-13 14 8 16 9 10-13 14 8 16 9 10-13 14 8 16 9 10-13 14 8 16 9 10-13 14 8 16 9 10-13 14 8 16 9 10-13 14 8 16 9 10-13 14 8 16 13 - 14 4 8
290 MET ME2 ME MET Methicillin NEO X 366 29ug X Penicillins Penicillin (Stable) PEN-S 01e X Methicilli 18945-6 324-4 323-6 7030-0 325-1 322-8 8 16 8 16 8 16 8 16 8 16 8 16 8 16 8 16 8 16 8 16 14 15-27 28 4 8
291 MTP MTP MTP Metioprim 264 Folate pathway inhibitors FOLATE 12a
292 MXT MXT MXT Metioxate 265 Quinolones Quinolone QUIN 11a
293 MTR MTR MTR MTR Metronidazole SRGA X 76 4ug Nitroimidazoles IMIDAZ 19 Metronidaz 18946-4 328-5 327-7 7031-8 329-3 326-9 4 32 4 8 4 16
294 MTR MT1 MTR MTR Metronidazole SFM,NEO X X 367 16ug Nitroimidazoles IMIDAZ 19 X Metronidaz 18946-4 328-5 327-7 7031-8 329-3 326-9 20 - 21 4 32 4 8 4 16
295 MTR MTR MTR MTR Metronidazole 430 5ug Nitroimidazoles IMIDAZ 19 X Metronidaz 18946-4 328-5 327-7 7031-8 329-3 326-9 4 32 4 8 4 16
296 MTR ME1 MTR MTR Metronidazole EUCAST X 199 10ug Nitroimidazoles IMIDAZ 19 X Metronidaz 18946-4 328-5 327-7 7031-8 329-3 326-9 4 32 4 8 4 16
297 MEZ MEZ MZ MZL Mezlocillin CLSI,SFM,BSAC X X X 40 75ug X Penicillins Ureidopenicillin PEN 01c X Mezlocilli 18947-2 332-7 331-9 41702-2 333-5 330-1 17 18-20 21 16 128 17 18-20 21 16 128 15 16-20 21 8 64 4 32 4 8 21 - 22 16 32
298 MEZ ME3 MZ MZL Mezlocillin DIN X 266 30ug X Penicillins Ureidopenicillin PEN 01c X Mezlocilli 18947-2 332-7 331-9 41702-2 333-5 330-1 16 128 16 128 16 128 16 128 16 128 16 128 16 128 16 128 16 128 16 128 8 64 16 17-22 23 4 32 4 8 16 32
299 MSU MSU MZS Mezlocillin/Sulbactam DIN X 267 30/15ug X Beta-lactam+Inhibitors BL+INH 03 16 17-21 22 4 32
300 MIF MIF Micafungin CLSI X 455 10ug Antifungals FUNG 29
301 MCZ MCZ MCZ MCZ MCZ Miconazole NEO X 268 10ug Antifungals FUNG 29 Miconazole 25607-3 25722-0
302 MCR MCR MCR MCR MCR Micronomicin 269 Aminoglycosides AG 09
303 MID MID MID MDM Midecamycin 118 100ug Macrolides MACRO 17
304 MIL MIL MIL Miloxacin 270 Quinolones Quinolone QUIN 11a
305 MNO MIN MNO MNO MINO Minocycline CLSI,EUCAST X X X 41 30ug Tetracyclines TETRA 24a X Minocyclin 18948-0 336-8 335-0 7032-6 337-6 334-3 12 13-15 16 4 16 12 13-15 16 4 16 12 13-15 16 4 16 12 13-15 16 4 16 12 13-15 16 4 16 12 13-15 16 4 16 12 13-15 16 4 16 12 13-15 16 4 16 12 13-15 16 4 16 12 13-15 16 4 16 16 17-18 19 4 16 1 8
306 MNO MI8 MNO MNO MINO Minocycline NEO X 368 80ug Tetracyclines TETRA 24 X Minocyclin 18948-0 336-8 335-0 7032-6 337-6 334-3 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 1 8
307 MON MON Monensin sodium 417 Combinations Coccidiostat/Ionophore OTHER 28
308 MOX MOX MOX LMO LMOX Moxalactam (Latamoxef) CLSI,SFM X X 42 30ug X Cephems Oxacephem OXACEPH 04f X Moxalactam 18950-6 344-2 343-4 41703-0 345-9 342-6 14 15-22 23 8 64 14 15-22 23 8 64 14 15-22 23 8 64 14 15-22 23 8 64 14 15-22 23 8 64 14 15-22 23 8 64 14 15-22 23 8 64 14 15-22 23 8 64 14 15-22 23 8 64 14 15-22 23 8 64 16 17-22 23 4 64
309 MFX MF1 MOX MFLX Moxifloxacin X 418 1ug Quinolones Fluoroquinolone FQ 11b X Moxifloxac 31039-1 31041-7 31037-5 31043-3 41502-6 .5 2 .5 2 .5 2 .5 2 .5 2 .5 2 .5 2 .5 2 .5 2 .5 2 1 4 1 4 19 - 20 1 2
310 MFX MFX MOX MFLX Moxifloxacin CLSI,EUCAST X X X X X 392 5ug Quinolones Fluoroquinolone FQ 11b X Moxifloxac 31039-1 31041-7 31037-5 31043-3 41502-6 20 21-23 24 .5 2 20 21-23 24 .5 2 20 21-23 24 .5 2 20 21-23 24 .5 2 20 21-23 24 .5 2 20 21-23 24 .5 2 20 21-23 24 .5 2 20 21-23 24 .5 2 20 21-23 24 .5 2 20 21-23 24 .5 2 16 17-19 20 0.5 2 20 21-23 24 .5 2 18 19-21 22 1 4 1 2
311 MUP MUP MUP MUP Mupirocin CLSI,NEO X X 124 10ug Pseudomonic acids PSEUDOM 27 X Mupirocin 20389-3 35822-6 35823-4 7033-4 19 - 20 2 - 4 8
312 MUP MU5 MUP MUP Mupirocin SFM,BSAC X X 419 5ug Pseudomonic acids PSEUDOM 27 X Mupirocin 20389-3 35822-6 35823-4 7033-4 - - 19 2 - 21 - 22 4 8
313 NAD NAD NDFX Nadifloxacin 456 Quinolones Fluoroquinolone FQ 11b
314 NAF NAF NF NCL Nafcillin CLSI X 43 1ug X Penicillins Penicillin (Stable) PEN-S 01e X Nafcillin 18951-4 348-3 347-5 41704-8 349-1 346-7 10 11-12 13 2 4 10 11-12 13 2 4 10 11-12 13 2 4 10 11-12 13 2 4 10 11-12 13 2 4 10 11-12 13 2 4 10 11-12 13 2 4 10 11-12 13 2 4 10 11-12 13 2 4 10 11-12 13 2 4
315 NAL NAL NA NAL NA Nalidixic acid CLSI,EUCAST X X X X 44 30ug Quinolones Quinolone QUIN 11a X Nalidixate 18952-2 352-5 351-7 7034-2 353-3 350-9 13 14-18 19 16 32 13 14-18 19 16 32 13 14-18 19 16 32 13 14-18 19 16 32 13 14-18 19 16 32 13 14-18 19 16 32 13 14-18 19 16 32 13 14-18 19 16 32 13 14-18 19 16 32 13 14-18 19 16 32 15 - 16 16 32 14 15-19 20 8 32 14 - 15 16 32 15 16-19 20 8 32
316 NAL NA1 NA NAL NA Nalidixic acid NEO X 369 130ug Quinolones Quinolone QUIN 11a X Nalidixate 18952-2 352-5 351-7 7034-2 353-3 350-9 16 32 16 32 16 32 16 32 16 32 16 32 16 32 16 32 16 32 16 32 14 15-27 28 8 32 16 32
317 NAR NAR Narasin 402 Combinations Coccidiostat/Ionophore OTHER 28
318 NEO NEO N NEO FRM Neomycin CLSI X 45 30ug Aminoglycosides AG 09 X Neomycin 18953-0 356-6 355-8 41705-5 357-4 354-1
319 NEO NE0 NEO FRM Neomycin X 420 10ug Aminoglycosides AG 09 X Neomycin 18953-0 356-6 355-8 41705-5 357-4 354-1 16 - 17
320 NEO NE2 N NEO FRM Neomycin NEO X 370 120ug Aminoglycosides AG 09 X Neomycin 18953-0 356-6 355-8 41705-5 357-4 354-1 14 15-27 28
321 NET NET NET NET NTL Netilmicin CLSI,SFM,SRGA X X X X 46 30ug Aminoglycosides AG 09 X Netilmicin 18954-8 360-8 359-0 7035-9 361-6 358-2 12 13-14 15 8 32 12 13-14 15 8 32 12 13-14 15 8 32 12 13-14 15 8 32 12 13-14 15 8 32 12 13-14 15 8 32 12 13-14 15 8 32 12 13-14 15 8 32 12 13-14 15 8 32 12 13-14 15 8 32 18 19-20 21 2 8 1 8 2 16 18 19-21 22 2 8 17 18-20 21 2 4 1 2
322 NET NE1 NET NET NTL Netilmicin EUCAST X X X 271 10ug Aminoglycosides AG 09 X Netilmicin 18954-8 360-8 359-0 7035-9 361-6 358-2 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 11 12-14 15 2 8 4 16 16 17-21 22 1 8 2 16 2 8 2 4 24 - 25 1 2
323 NET NE4 NET NET NTL Netilmicin NEO X 371 40ug Aminoglycosides AG 09 X Netilmicin 18954-8 360-8 359-0 7035-9 361-6 358-2 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 14 15-25 26 4 16 1 8 2 16 2 8 17 18-20 21 2 4 1 2
324 NIC NIC Nicarbazin 421 Coccidiostats COCC 27
325 NIF NIF NIF Nifuroquine 272 Quinolones Quinolone QUIN 11a
326 NTZ NTZ Nitazoxanide CLSI X 492 Thiazolides THIAZ 30 73595-1 73640-5 73617-3
327 NIT FU0 FT NFT Nitrofurantoin BSAC 327 50ug Nitrofurans FURAN 18 X Nitrofuran 18955-5 364-0 363-2 7036-7 365-7 362-4 32 128 32 128 32 128 32 128 32 128 32 128 32 128 32 128 32 128 32 128 32 256 64 512 32 64 16 32 32 64 32 64
328 NIT FU6 FT NFT Nitrofurantoin NEO X 372 260ug Nitrofurans FURAN 18 X Nitrofuran 18955-5 364-0 363-2 7036-7 365-7 362-4 32 128 32 128 32 128 32 128 32 128 32 128 32 128 32 128 32 128 32 128 14 15-27 28 32 256 64 512 32 64 16 32 32 64 32 64
329 NIT FU1 FT NFT Nitrofurantoin EUCAST X X X X 200 100ug Nitrofurans FURAN 18 X Nitrofuran 18955-5 364-0 363-2 7036-7 365-7 362-4 32 128 32 128 32 128 32 128 32 128 32 128 32 128 32 128 32 128 32 128 10 - 11 64 128 32 256 10 11-15 16 64 512 32 64 18 - 19 16 32 13 14-16 17 32 64 32 64
330 NIT FUR FT NFT Nitrofurantoin CLSI,SFM X X 47 300ug Nitrofurans FURAN 18 X Nitrofuran 18955-5 364-0 363-2 7036-7 365-7 362-4 14 15-16 17 32 128 14 15-16 17 32 128 14 15-16 17 32 128 14 15-16 17 32 128 14 15-16 17 32 128 14 15-16 17 32 128 14 15-16 17 32 128 14 15-16 17 32 128 14 15-16 17 32 128 14 15-16 17 32 128 13 14-16 17 32 256 64 512 32 64 16 32 32 64 32 64
331 NIT FU2 FT NFT Nitrofurantoin BSAC X 320 200ug Nitrofurans FURAN 18 X Nitrofuran 18955-5 364-0 363-2 7036-7 365-7 362-4 32 128 32 128 32 128 32 128 32 128 32 128 32 128 32 128 32 128 32 128 32 256 64 512 32 64 16 32 32 64 19 - 20 32 64
332 NIZ NIZ FC Nitrofurazone 166 Nitrofurans FURAN 18
333 NTR NIT NI NIT Nitroxoline SFM X 89 20ug Quinolones Quinolone QUIN 11a Nitroxolin 25608-1 25723-8 11 12-29 30 1 64
334 NOR NOR NOR NOR NFLX Norfloxacin CLSI,EUCAST X X X X 48 10ug Quinolones Fluoroquinolone FQ 11b X Norfloxaci 18956-3 368-1 367-3 7037-5 41504-2 369-9 366-5 12 13-16 17 4 16 12 13-16 17 4 16 12 13-16 17 4 16 12 13-16 17 4 16 12 13-16 17 4 16 12 13-16 17 4 16 12 13-16 17 4 16 12 13-16 17 4 16 12 13-16 17 4 16 18 19-21 22 0.5 2 12 13-25 26 1 4 23 24-26 27 1 4 1 4 17 18-23 24 .5 2 4 8
335 NOR NO5 NOR NOR NFLX Norfloxacin SFM X 201 5ug Quinolones Fluoroquinolone FQ 11b X Norfloxaci 18956-3 368-1 367-3 7037-5 41504-2 369-9 366-5 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 21 22-24 25 .5 2 1 4 1 4 .5 2 4 8
336 NOR NO2 NOR NOR NFLX Norfloxacin BSAC X 321 2ug Quinolones Fluoroquinolone FQ 11b X Norfloxaci 18956-3 368-1 367-3 7037-5 41504-2 369-9 366-5 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 1 4 1 4 1 4 .5 2 16 - 17 4 8
337 NVA NVA Norvancomycin 119 Glycopeptides Glycopeptide GLYCO 21a
338 NOV NOV NB Novobiocin CLSI,NEO X X 49 5ug Polypeptides Coumarin POLYPEP 26 X Novobiocin 18957-1 372-3 371-5 41706-3 373-1 370-7 15 - 16
339 NOV NO1 NB Novobiocin NEO X 373 100ug Polypeptides Coumarin POLYPEP 26 X Novobiocin 18957-1 372-3 371-5 41706-3 373-1 370-7 12 13-21 22
340 NYS NYS NY NYS NYS Nystatin NEO X 273 50ug Antifungals FUNG 29 Nystatin 18958-9 35824-2 10697-1 10698-9
341 OFX OFL OFX OFLX Ofloxacin CLSI,EUCAST X X X X 50 5ug Quinolones Fluoroquinolone FQ 11b X Ofloxacin 18959-7 376-4 375-6 7038-3 20384-4 23948-3 377-2 374-9 12 13-15 16 2 8 12 13-15 16 2 8 12 13-15 16 2 8 12 13-15 16 2 8 12 13-15 16 2 8 12 13-15 16 2 8 12 13-15 16 2 8 12 13-15 16 2 8 12 13-15 16 2 8 12 13-15 16 2 8 18 19-21 22 0.5 2 21 22-24 25 .5 1 17 18-21 22 1 4 1 8 .5 8 .5 2 2 4
342 OFX OF1 OFX OFLX Ofloxacin BSAC X 322 1ug Quinolones Fluoroquinolone FQ 11b X Ofloxacin 18959-7 376-4 375-6 7038-3 20384-4 23948-3 377-2 374-9 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 1 8 1 4 1 8 .5 8 .5 2 23 - 24 2 4
343 OFX OF0 OFX OFLX Ofloxacin AFA,SRGA,NEO X X X 202 10ug Quinolones Fluoroquinolone FQ 11b X Ofloxacin 18959-7 376-4 375-6 7038-3 20384-4 23948-3 377-2 374-9 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 12 13-23 24 1 8 1 4 1 8 17 18-27 28 .5 8 17 18-23 24 .5 2 2 4
344 OLE OLE OL OLE Oleandomycin 167 15ug Macrolides MACRO 17 Oleandomyc 18960-5 380-6 379-8 381-4 378-0
345 OMC OMC Omadacycline CLSI X 502 Tetracyclines Aminomethylcycline TETRA 24c X 73594-4 73639-7 73616-5
346 OPT OPT Optochin 168 5ug Optochins OPT 27
347 ORB ORB ORB Orbifloxacin CLSI X 469 10ug Quinolones Fluoroquinolone FQ 11b X Orbifloxac 35827-5 35825-9 35826-7 17 18-22 23 1 8 17 18-22 23 1 8 17 18-22 23 1 8 17 18-22 23 1 8 17 18-22 23 1 8 17 18-22 23 1 8 17 18-22 23 1 8 17 18-22 23 1 8 17 18-22 23 1 8 17 18-22 23 1 8
348 ORI ORI Oritavancin CLSI,EUCAST X X 442 Glycopeptides Glycopeptide LIPOGLYC 21a X Oritavanci 41736-0 41707-1 41708-9 41709-7
349 ORS ORS Ormetroprim/Sulfamethoxazole CLSI X 274 1.25/23.75ug Folate pathway inhibitors FOLATE 12a X 73593-6 73638-9 73615-7
350 ORN ORN ORN ORN Ornidazole 169 4ug Nitroimidazoles IMIDAZ 19
351 OXA OXA OX OXA Oxacillin CLSI,EUCAST X X X X X 51 1ug X Penicillins Penicillin (Stable) PEN-S 01e X Oxacillin 18961-3 384-8 383-0 7039-1 385-5 382-2 .25 .5 .25 .5 .25 .5 .25 .5 .25 .5 .25 .5 .25 .5 .25 .5 .25 .5 .25 .5 2 4 1 2 1 4 9 10-11 12 14 - 15 2 4
352 OXA OX5 OX OXA Oxacillin SFM,DIN,NEO X X X 203 5ug X Penicillins Penicillin (Stable) PEN-S 01e X Oxacillin 18961-3 384-8 383-0 7039-1 385-5 382-2 .25 .5 .25 .5 .25 .5 .25 .5 .25 .5 .25 .5 .25 .5 .25 .5 .25 .5 .25 .5 15 - 16 19 - 20 2 4 15 - 16 1 2 1 4 2 4
353 OXA OX1 OX OXA Oxacillin AFA X 398 10ug X Penicillins Penicillin (Stable) PEN-S 01e X Oxacillin 18961-3 384-8 383-0 7039-1 385-5 382-2 .25 .5 .25 .5 .25 .5 .25 .5 .25 .5 .25 .5 .25 .5 .25 .5 .25 .5 .25 .5 2 4 1 2 19 - 20 1 4 2 4
354 OXO OXO OA OXL Oxolinic acid CLSI X 470 2ug Quinolones Quinolone QUIN 11a X Oxolinate 55696-9 55697-7 55695-1 55698-5
355 OXO OXO OA OXL Oxolinic acid SFM X 90 10ug Quinolones Quinolone QUIN 11a Oxolinate 55696-9 55697-7 55695-1 55698-5 16 17-19 20 2 8
356 OXY OXY OT OTE OTC Oxytetracycline SFM X 170 30ug Tetracyclines TETRA 24 Oxytetracy 18962-1 388-9 387-1 389-7 386-3 16 17-18 19 4 16
357 OXY OX8 OT OTE OTC Oxytetracycline NEO X 374 80ug Tetracyclines TETRA 24 Oxytetracy 18962-1 388-9 387-1 389-7 386-3 14 15-27 28 4 16
358 PAS PAS PAS P-Aminosalicylic acid 171 Antimycobacterials MYCO 28 Para amino 23629-9 14332-1 23611-7
359 PAN PAN PAN PAPM-BP Panipenem 172 X Penems Carbapenems CARB 07a
360 PAR PAR PM PAR Paromomycin 275 Oligosaccharides OLIGO 27
361 PAZ PAZ PZF PZFX Pazufloxacin 457 Quinolones Fluoroquinolone FQ 11b
362 PEF PEF PEF Pefloxacin SFM X 52 5ug Quinolones Fluoroquinolone FQ 11b Pefloxacin 18963-9 35828-3 390-5 7040-9 15 16-21 22 1 8 1 8
363 PEF PE0 PEF Pefloxacin NEO X 375 10ug Quinolones Fluoroquinolone FQ 11b Pefloxacin 18963-9 35828-3 390-5 7040-9 1 8 1 8
364 PEN PEN P PEN PCG Penicillin G CLSI,SFM,DIN,SRGA X X X X X 53 10units X Penicillins Penicillin PEN 01a X Penicillin 18965-4 393-9 392-1 7041-7 394-7 391-3 28 - 29 .125 .25 28 - 29 .125 .25 28 - 29 .125 .25 28 - 29 .125 .25 28 - 29 .125 .25 28 - 29 .125 .25 28 - 29 .125 .25 28 - 29 .125 .25 28 - 29 .125 .25 28 - 29 .125 .25 7 8-28 29 .25 32 12 13-23 24 0.125 2 .25 8 10 11-22 23 1 32 30 31-33 34 .125 .25
365 PEN PE1 P PEN PCG Penicillin G EUCAST X X 323 1unit X Penicillins Penicillin PEN 01a X Penicillin 18965-4 393-9 392-1 7041-7 394-7 391-3 .125 .25 .125 .25 .125 .25 .125 .25 .125 .25 .125 .25 .125 .25 .125 .25 .125 .25 .125 .25 .25 32 0.125 2 .25 8 1 32 24 - 25 .125 .25
366 PEN PE5 P PEN PCG Penicillin G NEO X 376 5ug X Penicillins Penicillin PEN 01a X Penicillin 18965-4 393-9 392-1 7041-7 394-7 391-3 .125 .25 .125 .25 .125 .25 .125 .25 .125 .25 .125 .25 .125 .25 .125 .25 .125 .25 .125 .25 14 15-27 28 .25 32 0.125 2 .25 8 1 32 .125 .25
367 PNV PNV PV PEN Penicillin V CLSI,EUCAST X X X X 81 10ug X Penicillins Penicillin PEN 01a X Penicillin 18966-2 397-0 396-2 7042-5 398-8 395-4 0.125 2 20 21-25 26 1 4 30 31-33 34
368 PNO PNO Penicillin/Novobiocin CLSI X 84 10units/30ug Combinations Penicillin/Polypeptide OTHER 28 X Penicillin 35874-7 35872-1 35873-9 14 15-17 18 1 4 14 15-17 18 1 4 14 15-17 18 1 4 14 15-17 18 1 4 14 15-17 18 1 4 14 15-17 18 1 4 14 15-17 18 1 4 14 15-17 18 1 4 14 15-17 18 1 4 14 15-17 18 1 4
369 PSU PSU PCG-SBT Penicillin/Sulbactam DIN X 437 10/10 X Beta-lactam+Inhibitors BL+INH 03 20 21-25 26 0.125 2
370 PIM PIM PIM Pentisomicin 276 Aminoglycosides AG 09
371 PTZ PTZ PTZ Pentizidone 277 Oxazolidinones OXAZOLID 20
372 PHE PHE PEPC Phenethicillin 458 X Penicillins Penicillin PEN 01a Phenethici 18967-0 401-0 400-2 402-8 399-6
373 PMR PMR PMR Pimaricin (Natamycin) 459 Antifungals FUNG 29
374 PPA PPA PI PIM PPA Pipemidic acid DIN,SFM X X 54 20ug Quinolones Quinolone QUIN 11a Pipemidate 18968-8 405-1 404-4 406-9 403-6 13 14-18 19 8 32 16 - 17 4 8 8 16
375 PPA PP3 PI PIM PPA Pipemidic acid NEO X 377 30ug Quinolones Quinolone QUIN 11a Pipemidate 18968-8 405-1 404-4 406-9 403-6 8 32 4 8 8 16
376 PIP PI7 PIP PIP PIPC Piperacillin SFM,BSAC X X 207 75ug X Penicillins Ureidopenicillin PEN 01c X Piperacill 18969-6 409-3 408-5 7043-3 410-1 407-7 16 128 16 128 16 128 16 128 16 128 16 128 16 128 16 128 16 128 16 128 11 12-19 20 8 128 4 64 16 128 16 32 23 - 24 16 32
377 PIP PIP PIP PIP PIPC Piperacillin CLSI X 55 100ug X Penicillins Ureidopenicillin PEN 01c X Piperacill 18969-6 409-3 408-5 7043-3 410-1 407-7 17 18-20 21 16 128 17 18-20 21 16 128 17 18-20 21 16 128 17 18-20 21 16 128 17 18-20 21 16 128 17 18-20 21 16 128 17 18-20 21 16 128 17 18-20 21 16 128 17 18-20 21 16 128 17 18-20 21 16 128 9 10-27 28 8 128 4 64 16 128 16 32 16 32
378 PIP PI3 PIP PIP PIPC Piperacillin EUCAST X X X 206 30ug X Penicillins Ureidopenicillin PEN 01c X Piperacill 18969-6 409-3 408-5 7043-3 410-1 407-7 16 128 16 128 16 128 16 128 16 128 16 128 16 128 16 128 16 128 16 128 14 15-17 18 8 32 8 128 12 13-21 22 4 64 16 128 17 18-20 21 16 32 16 32
379 PIS PIS PIS PIPC-SBT Piperacillin/Sulbactam DIN X 278 30/15ug X Beta-lactam+Inhibitors BL+INH 03 13 14-21 22 4 64
380 TZP PTA PIT PIPC-TAZ Piperacillin/Tazobactam CLSI X 92 100/10ug X Beta-lactam+Inhibitors BL+INH 03 X Piperacill 18970-4 413-5 412-7 7044-1 414-3 411-9 17 18-20 21 16 128 17 18-20 21 16 128 17 18-20 21 16 128 17 18-20 21 16 128 17 18-20 21 16 128 17 18-20 21 16 128 17 18-20 21 16 128 16 128 17 18-20 21 16 128 17 18-20 21 16 128 9 10-27 28 8 128 4 64 16 64 8 32 16 32 16 32
381 TZP PT3 PIT PIPC-TAZ Piperacillin/Tazobactam EUCAST X X 204 30/6ug X Beta-lactam+Inhibitors BL+INH 03 X Piperacill 18970-4 413-5 412-7 7044-1 414-3 411-9 16 128 16 128 16 128 16 128 16 128 16 128 16 128 16 128 16 128 16 128 14 15-17 18 8 32 8 128 4 64 16 64 8 32 17 18-20 21 16 32 16 32
382 TZP PT7 PIT PIPC-TAZ Piperacillin/Tazobactam SFM,BSAC X X 205 75/10ug X Beta-lactam+Inhibitors BL+INH 03 X Piperacill 18970-4 413-5 412-7 7044-1 414-3 411-9 16 128 16 128 16 128 16 128 16 128 16 128 16 128 16 128 16 128 16 128 13 14-20 21 8 128 4 64 16 64 8 32 16 32 23 - 24 16 32
383 TZP PT1 PIT PIPC-TAZ Piperacillin/Tazobactam DIN X 279 30/10ug X Beta-lactam+Inhibitors BL+INH 03 X Piperacill 18970-4 413-5 412-7 7044-1 414-3 411-9 16 128 16 128 16 128 16 128 16 128 16 128 16 128 16 128 16 128 16 128 8 128 14 15-21 22 4 64 16 64 8 32 16 32 16 32
384 PRC PRC PRC Piridicillin 280 X Penicillins ? PEN 01h
385 PRL PIL Pirlimycin CLSI X 173 2ug Lincosamides LINCO 15 X Pirlimycin 35831-7 35829-1 35830-9 12 - 13 2 4 12 - 13 2 4 12 - 13 2 4 12 - 13 2 4 12 - 13 2 4 12 - 13 2 4 12 - 13 2 4 12 - 13 2 4 12 - 13 2 4 12 - 13 2 4
386 PIR PIA PIR PA Piromidic acid SFM X 281 25ug Quinolones Quinolone QUIN 11a 15 16-19 20 16 64
387 PME PME PMPC Pivmecillinam (Amdinocillin pivoxil) 460 X Penicillins Amidinopenicillin PEN 01f
388 PLZ PLZ Plazomicin CLSI X 503 Aminoglycosides AG 09 X 73592-8 73637-1 73614-0
389 POL POL PB POL PL-B Polymixin B CLSI X 471 300units Lipopeptides Polymyxin LIPOPEP 16 X Polymyxin 18972-0 421-8 420-0 35832-5 422-6 419-2 11 - 12 2 8 11 - 12 2 8 11 - 12 2 8 11 - 12 2 8 11 - 12 2 8 11 - 12 2 8 11 - 12 2 8 11 - 12 2 8 11 - 12 2 8 11 - 12 2 8
390 POL POL PB POL PL-B Polymixin B 56 50ug Lipopeptides Polymyxin LIPOPEP 16 X Polymyxin 18972-0 421-8 420-0 35832-5 422-6 419-2 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8 2 8
391 POS POS Posaconazole CLSI,NEO X 478 5ug Antifungals FUNG 29
392 PRX PRX PRE Premafloxacin CLSI X 403 1ug Quinolones Fluoroquinolone FQ 11b X 73591-0 73636-3 73613-2
393 PRM PRM PRM Primycin 282 Macrolides MACRO 17
394 PRI PR3 PT PRI Pristinamycin NEO X 378 30ug Streptogramins STREPTOG 23 Pristinamy 32383-2 35833-3 35834-1 1 4
395 PRI PRI PT Pristinamycin SFM X 93 15ug Streptogramins STREPTOG 23 Pristinamy 32383-2 35833-3 35834-1 18 19-21 22 1 4
396 PRP PRP PR PRO Propicillin DIN X 174 X Penicillins Aminopenicillin PEN 01b 0.125 0.25
397 PKA PKA PKA Propikacin 283 Aminoglycosides AG 09
398 PTH PRT PTH PTH Prothionamide 175 Antimycobacterials MYCO 28
399 PRU PRU PUFX Prulifloxacin 461 Quinolones Fluoroquinolone FQ 11b
400 PZA PZA PZA PZA Pyrazinamide 135 Antimycobacterials MYCO 28 Pyrazinami 18973-8 425-9 424-2 20461-0 23632-3 426-7 423-4
401 QDA QUI QPD QPR/DPR Quinupristin/Dalfopristin CLSI,EUCAST X X X X 176 15ug Streptogramins STREPTOG 23 X Quinuprist 23640-6 35835-8 23641-4 33334-4 15 16-18 19 1 4 15 16-18 19 1 4 15 16-18 19 1 4 15 16-18 19 1 4 15 16-18 19 1 4 15 16-18 19 1 4 15 16-18 19 1 4 15 16-18 19 1 4 15 16-18 19 1 4 15 16-18 19 1 4 18 19-24 25 .5 4 19 - 20 2 4
402 RAC RAC Ractopamine 422 Phenethylamines PHEN 27 X
403 RAM RAM Ramoplanin CLSI X 493 Glycopeptides Lipoglycopeptide LIPOGLYC 21a X Ramoplanin 41737-8 41712-1 41710-5 41711-3
404 RZM RZM Razupenem CLSI X 489 10ug X Penems Carbapenems CARB 07a X 73590-2 73635-5 73612-4
405 RST RST RSM Ribostamycin 462 Aminoglycosides AG 09
406 RIB RIB RIB Rifabutin 136 Ansamycins RIF 10 Rifabutin 19149-4 16100-0 20386-9 23630-7
407 RIF RI3 RA RAM RFP Rifampin SFM,NEO X X 58 30ug Ansamycins RIF 10 X Rifampin 18974-6 429-1 428-3 7045-8 20385-1 23949-1 430-9 427-5 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 14 15-27 28 13 14-18 19 4 32 1 2 1 2 1 2 .125 .06
408 RIF RIF RA RAM RFP Rifampin CLSI,EUCAST X X X X 57 5ug Ansamycins RIF 10 X Rifampin 18974-6 429-1 428-3 7045-8 20385-1 23949-1 430-9 427-5 16 17-19 20 1 4 16 17-19 20 1 4 16 17-19 20 1 4 16 17-19 20 1 4 16 17-19 20 1 4 16 17-19 20 1 4 16 17-19 20 1 4 16 17-19 20 1 4 16 17-19 20 1 4 16 17-19 20 1 4 4 32 1 2 25 26 27 1 2 21 22-24 25 1 2 .125 .06
409 RIF RI2 RA RAM RFP Rifampin BSAC X 324 2ug Ansamycins RIF 10 X Rifampin 18974-6 429-1 428-3 7045-8 20385-1 23949-1 430-9 427-5 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 1 4 4 32 1 2 1 2 1 2 29 - 30 .125 .06
410 Rifaximin CLSI X 494 Ansamycins RIF 73589-4 73634-8 73611-6
411 RIT RIT RIPM Ritipenem 463 X Penems Carbapenems CARB 07a
412 RIA RIA RIPM-AC Ritipenem acoxil 464 X Penems Carbapenems CARB 07a
413 ROK ROK ROK ROK RKM Rokitamycin 284 Macrolides MACRO 17
414 ROS ROS ROS ROS Rosoxacin SFM X 94 5ug Quinolones Quinolone QUIN 11a Rosoxacin 18977-9 441-6 440-8 442-4 439-0 1 2
415 RXT RO3 RXT ROX RXM Roxithromicin NEO X 379 30ug Macrolides MACRO 17 Roxithromy 18978-7 445-7 444-0 7046-6 446-5 443-2 12 13-17 18 1 2 1 2
416 RXT ROX RXT ROX RXM Roxithromicin SRGA X 77 15ug Macrolides MACRO 17 Roxithromy 18978-7 445-7 444-0 7046-6 446-5 443-2 1 2 19 20-24 25 1 2
417 SAL SAL Salinomycin 423 Combinations Coccidiostat/Ionophore OTHER 28 Salinomyci 35838-2 35836-6 35837-4
418 SAR SAR SAR Sarafloxacin CLSI X 285 5ug Quinolones Fluoroquinolone FQ 11b X 73588-6 73633-0 73610-8
419 SRX SRX SRX Sarmoxicillin 286 X Penicillins Aminopenicillin PEN 01b
420 SIS SIS SIS SIS SISO Sisomicin SFM X 78 10ug Aminoglycosides AG 09 Sisomicin 18979-5 449-9 448-1 450-7 447-3 13 14-15 16 4 16
421 SIT SIT SIT STFX Sitafloxacin 465 Quinolones Fluoroquinolone FQ 11b
422 SOL SOL Solithromycin CLSI X 504 Macrolides Fluoroketolide MACRO 17c X 73587-8 73632-2 73609-0
423 SPX SP2 SPF SPFX Sparfloxacin BSAC 325 2ug Quinolones Fluoroquinolone FQ 11b X Sparfloxac 23628-1 35839-0 20397-6 7047-4 23610-9 .5 2 .5 2 .5 2 .5 2 .5 2 .5 2 .5 2 .5 2 .5 2 .5 2 1 4 1 4
424 SPX SPA SPF SPFX Sparfloxacin CLSI,SFM,DIN X X X 110 5ug Quinolones Fluoroquinolone FQ 11b X Sparfloxac 23628-1 35839-0 20397-6 7047-4 23610-9 15 16-18 19 .5 2 15 16-18 19 .5 2 15 16-18 19 .5 2 15 16-18 19 .5 2 15 16-18 19 .5 2 15 16-18 19 .5 2 15 16-18 19 .5 2 15 16-18 19 .5 2 15 16-18 19 .5 2 15 16-18 19 .5 2 15 16-19 20 1 4 18 19-22 23 1 4
425 SPX SP1 SPF SPFX Sparfloxacin NEO X 380 10ug Quinolones Fluoroquinolone FQ 11b Sparfloxac 23628-1 35839-0 20397-6 7047-4 23610-9 .5 2 .5 2 .5 2 .5 2 .5 2 .5 2 .5 2 .5 2 .5 2 .5 2 1 4 1 4
426 SPT SP0 SPT SPT SPCM Spectinomycin NEO X 381 200ug Aminocyclitols AMINOC 08 X Spectinomy 18980-3 453-1 452-3 35840-8 454-9 451-5 32 128 32 128 32 128 32 128 32 128 32 128 32 128 32 128 32 128 32 128 64 128 8 16 64 128
427 SPT SPE SPT SPT SPCM Spectinomycin CLSI,EUCAST X X X 59 100ug Aminocyclitols AMINOC 08 X Spectinomy 18980-3 453-1 452-3 35840-8 454-9 451-5 14 15-17 18 32 128 14 15-17 18 32 128 19 - 20 64 128 8 16 64 128
428 SPT SP5 SPT SPCM Spectinomycin X 424 25ug Aminocyclitols AMINOC 08 X Spectinomy 18980-3 453-1 452-3 35840-8 454-9 451-5 32 128 32 128 32 128 32 128 32 128 32 128 32 128 32 128 32 128 32 128 64 128 8 16 13 - 14 64 128
429 SPI SPI SP SPM SPM Spiramycin SFM X 95 100ug Macrolides MACRO 17 Spiramycin 18981-1 457-2 456-4 458-0 455-6 18 19-23 24 1 8
430 SPI SM2 SP SPM SPM Spiramycin NEO X 382 200ug Macrolides 16-Membered ring MACRO 17 Spiramycin 18981-1 457-2 456-4 458-0 455-6 1 8
431 STR STR S STR SM Streptomycin CLSI,SFM,BSAC X X X 60 10ug Aminoglycosides AG 09 X Streptomyc 18982-9 461-4 460-6 7048-2 20462-8 23626-5 462-2 459-8 11 12-14 15 11 12-14 15 11 12-14 15 11 12-14 15 11 12-14 15 11 12-14 15 11 12-14 15 11 12-14 15 11 12-14 15 11 12-14 15 12 13-14 15 8 32 4 32 12 - 13 8 16
432 STR ST1 S STR SM Streptomycin NEO X 383 100ug Aminoglycosides AG 09 X Streptomyc 18982-9 461-4 460-6 7048-2 20462-8 23626-5 462-2 459-8 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 14 15-27 28 8 32 4 32 8 16
433 STH STH Streptomycin-High CLSI X 139 300ug Aminoglycosides AG 09 X Streptomyc 18983-7 7049-0 6933-6 35841-6 6 7-9 10 1024 1025 6 7-9 10 1024 1025 6 7-9 10 1024 1025 6 7-9 10 1024 1025 6 7-9 10 1024 1025 6 7-9 10 1024 1025 6 7-9 10 1024 1025 6 7-9 10 1024 1025 6 7-9 10 1024 1025 6 7-9 10 1024 1025 250 501 500 1000
434 STH ST5 Streptomycin-High SFM,NEO X X 208 500ug Aminoglycosides AG 09 X Streptomyc 18983-7 7049-0 6933-6 35841-6 1000 1001 1000 1001 1000 1001 1000 1001 1000 1001 1000 1001 1000 1001 1000 1001 1000 1001 1000 1001 11 12-13 14 250 501 500 1000
435 SUL SBM SUL SBT Sulbactam CLSI,SFM X X 397 X Beta-lactamase inhibitors BL-INH 02 Sulbactam 41739-4 41716-2 41718-8 41717-0 8 -
436 SBC SLB SBC SBPC Sulbenicillin 125 X Penicillins Sulfonopenicillin PEN 01g
437 SUC SUC SUC Sulconazole 287 Antifungals FUNG 29
438 SUP SUP Sulfachlorpyridazine 288 Folate pathway inhibitors FOLATE 12a
439 SDI SDI SLD Sulfadiazine 425 Folate pathway inhibitors FOLATE 12a Sulfadiazi 18984-5 465-5 464-8 7050-8 466-3 463-0
440 SUD SUD X Sulfadimethoxine 289 Folate pathway inhibitors FOLATE 12a
441 SDM SDM SDM Sulfadimidine AFA X 290 250ug Folate pathway inhibitors FOLATE 12a 12 13-25 26 16 256
442 SZO SZO SZO Sulfamazone 291 Folate pathway inhibitors FOLATE 12a
443 SUM SUM Sulfamethazine 292 Folate pathway inhibitors FOLATE 12a
444 SMX SMX SMX SOZ Sulfamethoxazole CLSI,SFM X X 427 200-300ug Folate pathway inhibitors FOLATE 12a X Sulfametho 18985-2 469-7 468-9 11577-4 470-5 467-1 12 13-16 17 256 512 12 13-16 17 256 512 12 13-16 17 256 512 12 13-16 17 256 512 12 13-16 17 256 512 12 13-16 17 256 512 12 13-16 17 256 512 12 13-16 17 256 512 12 13-16 17 256 512 12 13-16 17 256 512 14 15-27 28 11 12-16 17 64 512 32 128 32 64
445 SMX SMX SMX SOZ Sulfamethoxazole X 293 100ug Folate pathway inhibitors FOLATE 12a X Sulfametho 18985-2 469-7 468-9 11577-4 470-5 467-1 256 512 256 512 256 512 256 512 256 512 256 512 256 512 256 512 256 512 256 512 64 512 32 128 13 - 14 32 64
446 SNA SNA SNA Sulfasuccinamide 294 Folate pathway inhibitors FOLATE 12a
447 SUT SUT ST Sulfathiazole 295 Folate pathway inhibitors FOLATE 12a
448 SOX SOX Sulfisoxazole CLSI X 404 200-300ug Folate pathway inhibitors FOLATE 12a X Sulfisoxaz 18986-0 473-9 472-1 11578-2 474-7 471-3 12 13-16 17 256 512 12 13-16 17 256 512 12 13-16 17 256 512 12 13-16 17 256 512 12 13-16 17 256 512 12 13-16 17 256 512 12 13-16 17 256 512 12 13-16 17 256 512 12 13-16 17 256 512 12 13-16 17 256 512 64 512
449 SSS SUL SSS SSS Sulfonamides CLSI,SFM X X 61 200-300ug Folate pathway inhibitors FOLATE 12a X Sulfonamid 18987-8 477-0 476-2 35842-4 478-8 475-4 12 13-16 17 256 512 12 13-16 17 256 512 12 13-16 17 256 512 12 13-16 17 256 512 12 13-16 17 256 512 12 13-16 17 256 512 12 13-16 17 256 512 12 13-16 17 256 512 12 13-16 17 256 512 12 13-16 17 256 512 14 15-27 28 11 12-16 17 64 512 32 128 32 64
450 SLP SLP Sulopenem CLSI X 484 X Penems Penem PENEM 07b X Sulopenem 55289-3 55291-9 55290-1
451 TAL TAL TAPC Talampicillin 466 X Penicillins Aminopenicillin PEN 01b Talampicil 18988-6 481-2 480-4 482-0 479-6
452 TLP TLP TLP Talmetoprim 296 Folate pathway inhibitors FOLATE 12a
453 TAZ TAZ TAB TAZ Tazobactam CLSI X 297 X Beta-lactamase inhibitors BL-INH 02 Tazobactam 41740-2 41719-6 41721-2 41720-4
454 TZD TED Tedizolid CLSI,EUCAST X X 505 Oxazolidinones OXAZOLID 20 73586-0 73631-4 73608-2
455 TEC TE6 TEC TPL TEIC Teicoplanin NEO X 384 60ug Glycopeptides Lipoglycopeptide GLYCO 21b X Teicoplani 18989-4 485-3 484-6 7051-6 486-1 483-8 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 8 32 12 13-21 22 4 32 2 8 4 16 4 8 4 8
456 TEC TEI TEC TPL TEIC Teicoplanin CLSI,EUCAST X X X X X 79 30ug Glycopeptides Lipoglycopeptide GLYCO 21b X Teicoplani 18989-4 485-3 484-6 7051-6 10 11-13 14 8 32 10 11-13 14 8 32 10 11-13 14 8 32 10 11-13 14 8 32 10 11-13 14 8 32 10 11-13 14 8 32 10 11-13 14 8 32 10 11-13 14 8 32 10 11-13 14 8 32 10 11-13 14 8 32 - - 17 4 16 2 8 14 15 16 4 16 11 12-15 16 4 8 14 - 15 4 8
457 TCM TCM TEIC Teicoplanin-Macromethod 440 Glycopeptides Lipoglycopeptide GLYCO 21b
458 TLV TLV Telavancin CLSI X 472 30ug Glycopeptides Lipoglycopeptide GLYCO 21b X 72894-9 73630-6 72894-9
459 TLT TLT TEL TEL Telithromycin CLSI,EUCAST X X X 396 15ug Macrolides Ketolide MACRO 17b X Telithromy 35845-7 35843-2 35844-0 41722-0 18 19-21 22 1 4 18 19-21 22 1 4 18 19-21 22 1 4 18 19-21 22 1 4 18 19-21 22 1 4 18 19-21 22 1 4 18 19-21 22 1 4 18 19-21 22 1 4 18 19-21 22 1 4 18 19-21 22 1 4 16 17-20 21 .5 4
460 TMX TEM TMX TEM Temafloxacin CLSI X 111 5ug Quinolones Fluoroquinolone FQ 11b X Temafloxac 18990-2 489-5 488-7 490-3 487-9
461 TEM TEL TEM TMO Temocillin NEO X 298 30ug X Penicillins Penicillin (Stable) PEN-S 01e Temocillin 18991-0 493-7 492-9 494-5 491-1
462 TRB TRB Terbinafine 479 Antifungals FUNG 29
463 TRC TRC Terconazole 480 Antifungals FUNG 29
464 TCY TET TE TET TC Tetracycline CLSI,EUCAST X X X X X X X 62 30ug Tetracyclines TETRA 24a X Tetracycli 18993-6 497-8 496-0 7052-4 498-6 495-2 11 12-14 15 4 16 11 12-14 15 4 16 11 12-14 15 4 16 11 12-14 15 4 16 11 12-14 15 4 16 11 12-14 15 4 16 11 12-14 15 4 16 11 12-14 15 4 16 11 12-14 15 4 16 11 12-14 15 4 16 16 17-18 19 4 16 16 17-21 22 1 8 1 8 19 20-24 25 1 4 21 22-24 25 2 4 33 - 34 1 2
465 TCY TE8 TE TET TC Tetracycline NEO X 399 80ug Tetracyclines TETRA 24 X Tetracycli 18993-6 497-8 496-0 7052-4 498-6 495-2 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 14 15-27 28 4 16 1 8 1 8 1 4 2 4 1 2
466 TCY TE1 TE TET TC Tetracycline BSAC,NEO X X 326 10ug Tetracyclines TETRA 24 X Tetracycli 18993-6 497-8 496-0 7052-4 498-6 495-2 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 1 8 1 8 1 4 2 4 1 2
467 TET TEP TET TTP Tetroxoprim 299 Folate pathway inhibitors FOLATE 12a
468 THA THA Thiacetazone 177 Antimycobacterials MYCO 28 Thiacetazo 32384-0
469 THI THI TP TPH TP Thiamphenicol 120 30ug Phenicols PHEN 22 Thiampheni 41723-8 41725-3 41724-6
470 THI TH6 TP TPH TP Thiamphenicol NEO X 385 60ug Phenicols PHEN 22 Thiampheni 41723-8 41725-3 41724-6
471 TIA TIA TIA Tiamulin CLSI,NEO X X 178 30ug Pleuromutilins OTHER 28 X Tiamulin 35848-1 35846-5 35847-3 8 - 9 16 32 8 - 9 16 32 8 - 9 16 32 8 - 9 16 32 8 - 9 16 32 8 - 9 16 32 8 - 9 16 32 8 - 9 16 32 8 - 9 16 32 8 - 9 16 32
472 TIC TIC TIC TIC Ticarcillin CLSI,EUCAST X X X 63 75ug X Penicillins Carboxypenicillin PEN 01d X Ticarcilli 18994-4 501-7 500-9 7053-2 502-5 499-4 14 15-19 20 16 128 14 15-19 20 16 128 21 22 23 8 32 9 10-27 28 17 18-21 22 16 128 16 128
473 TCC TIM TCC TCC Ticarcillin/Clavulanic acid CLSI,EUCAST X X X X X 64 75/10-15ug X Beta-lactam+Inhibitors BL+INH 03 X Ticarcilli 18995-1 505-8 504-1 7054-0 506-6 503-3 14 15-19 20 16 128 14 15-19 20 16 128 14 15-19 20 16 128 14 15-19 20 16 128 14 15-19 20 16 128 14 15-19 20 16 128 14 15-19 20 16 128 14 15-19 20 16 128 14 15-19 20 16 128 14 15-19 20 16 128 8 32 9 10-27 28 17 18-21 22 16 128 15 16-19 20 16 128 20 - 21 16 32
474 TGC TGC TGC Tigecycline CLSI,EUCAST X X 473 15ug Tetracyclines Glycylglycine TETRA 24b X Tigecyclin 42357-4 42356-6 42355-8 42354-1 14 15-17 18 1 4 21 - 22 .25 1
475 TBQ TBQ TBQ Tilbroquinol 300 Quinolones Quinolone QUIN 11a
476 TIL TIL Tilmicosin CLSI X 179 15ug Macrolides 16-Membered ring MACRO 17a X Tilmicosin 35851-5 35849-9 35850-7 10 11-13 14 8 32 10 11-13 14 8 32 10 11-13 14 8 32 10 11-13 14 8 32 10 11-13 14 8 32 10 11-13 14 8 32 10 11-13 14 8 32 10 11-13 14 8 32 10 11-13 14 8 32 10 11-13 14 8 32
477 TIN TIN TNZ Tinidazole CLSI X 180 4ug Nitroimidazoles IMIDAZ 29 Tinidazole 54928-7 55721-5 55720-7 55722-3
478 TIN TI1 TNZ Tinidazole CLSI,NEO X 386 16ug Nitroimidazoles IMIDAZ 29 Tinidazole 54928-7 55721-5 55720-7 55722-3
479 TDC TDC TDC Tiodonium chloride 301 Thiophenes THIO 27
480 TXC TXC TXC Tioxacin 302 Quinolones Quinolone QUIN 11a
481 TIZ TIZ Tizoxanide CLSI X 495 Thiazolides THIAZ 30 73585-2 73629-8 73607-4
482 TOB TO3 TM TOB TOB Tobramycin AFA,SRGA X X 209 30ug Aminoglycosides AG 09 X Tobramycin 18996-9 509-0 508-2 7055-7 25800-4 510-8 507-4 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 1 8 1 8 18 19-22 23 2 8 17 18-20 21 2 4 1 2
483 TOB TO4 TM TOB TOB Tobramycin NEO X 387 40ug Aminoglycosides AG 09 X Tobramycin 18996-9 509-0 508-2 7055-7 25800-4 510-8 507-4 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 4 16 14 15-25 26 4 16 1 8 1 8 2 8 2 4 1 2
484 TOB TOB TM TOB TOB Tobramycin CLSI,EUCAST X X X X X 65 10ug Aminoglycosides AG 09 X Tobramycin 18996-9 509-0 508-2 7055-7 25800-4 510-8 507-4 12 13-14 15 4 16 12 13-14 15 4 16 12 13-14 15 4 16 12 13-14 15 4 16 12 13-14 15 4 16 12 13-14 15 4 16 12 13-14 15 4 16 12 13-14 15 4 16 12 13-14 15 4 16 12 13-14 15 4 16 11 12-14 15 2 8 14 15-16 17 8 32 15 16-18 19 1 8 1 8 2 8 2 4 17 - 18 1 2
485 TFX TFX TFX TOS TFLX Tosufloxacin 303 Quinolones Fluoroquinolone FQ 11b
486 TMP TM2 TRP Trimethoprim X 426 2.5ug Folate pathway inhibitors FOLATE 12a X Trimethopr 18997-7 513-2 512-4 7056-5 23614-1 514-0 511-6 8 16 8 16 8 16 8 16 8 16 8 16 8 16 8 16 8 16 8 16 4 16 1 4 2 8 2 8 14 15-19 20 .5 4
487 TMP TMP TMP TRP Trimethoprim CLSI,EUCAST X X X X X X 66 5ug Folate pathway inhibitors FOLATE 12a X Trimethopr 18997-7 513-2 512-4 7056-5 23614-1 514-0 511-6 10 11-15 16 8 16 10 11-15 16 8 16 10 11-15 16 8 16 10 11-15 16 8 16 10 11-15 16 8 16 10 11-15 16 8 16 10 11-15 16 8 16 10 11-15 16 8 16 10 11-15 16 8 16 10 11-15 16 8 16 14 15-17 18 2 8 11 12-15 16 4 16 1 4 16 17-20 21 2 8 13 14-16 17 2 8 .5 4
488 TMP TM5 TMP TRP Trimethoprim NEO X 388 5.2ug Folate pathway inhibitors FOLATE 12a X Trimethopr 18997-7 513-2 512-4 7056-5 23614-1 514-0 511-6 8 16 8 16 8 16 8 16 8 16 8 16 8 16 8 16 8 16 8 16 12 13-21 22 4 16 1 4 2 8 2 8 .5 4
489 SXT SXT SXT SXT ST Trimethoprim/Sulfamethoxazole CLSI,EUCAST X X X X X X X 67 1.25/23.75ug Folate pathway inhibitors FOLATE 12a X Trimethopr 18998-5 517-3 516-5 7057-3 20387-7 23631-5 518-1 515-7 10 11-15 16 2 4 10 11-15 16 2 4 10 11-15 16 2 4 10 11-15 16 2 4 10 11-15 16 2 4 10 11-15 16 2 4 10 11-15 16 2 4 10 11-15 16 2 4 10 11-15 16 2 4 10 11-15 16 2 4 12 13-15 16 2 8 9 10-15 16 2 16 10 11-15 16 16 128 1 4 13 14-25 26 2 8 13 14-16 17 16 64 15 - 16 32 64
490 SXT SX5 SXT SXT ST Trimethoprim/Sulfamethoxazole NEO X 389 5.2/240ug Folate pathway inhibitors FOLATE 12a X Trimethopr 18998-5 517-3 516-5 7057-3 20387-7 23631-5 518-1 515-7 2 4 2 4 2 4 2 4 2 4 2 4 2 4 2 4 2 4 2 4 14 15-27 28 2 16 16 128 1 4 2 8 16 64 32 64
491 TRL TRL Troleandomycin 181 Macrolides MACRO 17 Troleandom 18999-3 521-5 520-7 522-3 519-9
492 TRO TRO TRS Trospectomycin CLSI X 112 30ug Aminocyclitols AMINOC 08 X Trospectin 35854-9 35852-3 35853-1
493 TVA TRV TRO Trovafloxacin CLSI,SFM X X 182 10ug Quinolones Fluoroquinolone FQ 11b X Trovafloxa 23642-2 35855-6 23643-0 7058-1 16 17-19 20 1 4 1 4 .25 2
494 TVA TRV TRO Trovafloxacin DIN X 438 5ug Quinolones Fluoroquinolone FQ 11b X Trovafloxa 23642-2 35855-6 23643-0 7058-1 16 17-19 20 1 4
495 TYL TYL TI TLS Tylosin NEO X 304 150ug Macrolides 16-Membered ring MACRO 17 X Tylosin 35858-0 35856-4 35857-2
496 PRU PRU Ulifloxacin (Prulifloxacin) 490 5ug Quinolones Fluoroquinolone FQ 11b
497 VAN VA7 VA VAN VCM Vancomycin NEO X 390 70ug Glycopeptides Glycopeptide GLYCO 21a X Vancomycin 19000-9 525-6 524-9 7059-9 23615-8 526-4 523-1 4 32 4 32 4 32 4 32 4 32 4 32 4 32 4 32 4 32 4 32 12 13-21 22 4 32 4 16 4 16 4 16 4 8 4 8
498 VAN VAN VA VAN VCM Vancomycin CLSI,AFA,SFM X X X 68 30ug Glycopeptides Glycopeptide GLYCO 21a X Vancomycin 19000-9 525-6 524-9 7059-9 23615-8 526-4 523-1 4 32 4 32 4 32 4 32 4 32 4 32 4 32 4 32 4 32 4 32 - - 17 4 16 4 16 4 16 16 17-19 20 4 16 4 8 4 8
499 VAN VA5 VA VAN VCM Vancomycin EUCAST,NEO X X X X 305 5ug Glycopeptides Glycopeptide GLYCO 21a X Vancomycin 19000-9 525-6 524-9 7059-9 23615-8 526-4 523-1 4 32 4 32 4 32 4 32 4 32 4 32 4 32 4 32 4 32 4 32 15 - 16 4 32 4 16 4 16 4 16 9 10-10 11 4 8 11 - 12 4 8
500 VAM VAM VCM Vancomycin-Macromethod 436 Glycopeptides Glycopeptide GLYCO 21a
501 VIO VIO VIO Viomycin 183 Antimycobacterials MYCO 28 Viomycin 19001-7 529-8 528-0 23616-6 530-6 527-2
502 VIR VI3 VG VIR Virginiamycine NEO X 391 30ug Streptogramins STREPTOG 23 Virginiamy 35861-4 35859-8 35860-6
503 VIR VIR VG VIR Virginiamycine SFM X 184 15ug Streptogramins STREPTOG 23 Virginiamy 35861-4 35859-8 35860-6
504 VOR VOR VRCZ Voriconazole CLSI,NEO X 431 1ug Antifungals FUNG 29 X Voriconazo 32379-0 41200-7 35863-0 35862-2 41199-1
505 AZA AZA Aztreonam/Avibactam CLSI X 510 30/20ug Beta-lactam+inhibitors BL+INH
506 POP POP Polymyxin B/Polysorbate 80 CLSI X 509 300units Lipopeptides Polymyxin LIPOPEP 16 X
507 SUR SUR Surotomycin CLSI X 514 Lipopeptides LIPOPEP
508 COP COP Colistin/Polysorbate CLSI X 508 10ug Lipopeptides LIPOPEP 16 X
509 ERV ERV Eravacycline CLSI X 513 20ug Fluorocyclines OTHER 28
510 DLM DLM Delamanid X 512
511 BDQ BDQ Bedaquiline X 511
512 FOV FOV Cefovecin CLSI X 515 Cephems Cephalosporin III CEPH3 04c X
513 GAM GAM Gamithromycin CLSI X 516 Macrolides 15-Membered ring MACRO X
514 KAC KAC Kanamycin/Cephalexin CLSI X 517 Combinations Aminoglycoside/Cephem OTHER 28 X
515 TIP TIP Tildipirosin CLSI X 519 Macrolides 16-Membered ring MACRO X
516 PRA PRA Pradofloxacin CLSI X 518 Quinolones Fluoroquinolone FQ 11b X
517 TUL TUL Tulathromycin CLSI X 520 Macrolides 15-Membered ring MACRO X 14 15-17 18 16 64 14 15-17 18 16 64 14 15-17 18 16 64 14 15-17 18 16 64 14 15-17 18 16 64
518 Tylvalosin CLSI X 521 Macrolides 16-Membered ring MACRO X
519 AKF AKF Amikacin/Fosfomycin CLSI X 522 Combinations Aminoglycoside/Fosfomycin OTHER 28
520 CDZ CDZ Cadazolid CLSI X 523 Quinolonyl oxazolidinones OTHER 28
521 FPT FPT Cefepime/Tazobactam CLSI X 524 Beta-lactam+Inhibitors BL+INH 03c
522 DFX DFX Delafloxacin CLSI X 525 5ug Quinolones Quinolone QUIN 11a
523 GEP GEP Gepotidacin CLSI X 526 10ug Triazaacenaphylenes OTHER 28
524 IMR IMR Imipenem/relebactam CLSI X 527 Beta-lactam+Inhibitors BL+INH 03c
525 LMU LMU Lefamulin CLSI X 528 20ug Pleuromutilins OTHER 28
526 LND LND Levonadifloxacin CLSI X 529 10ug Quinolones Benzoquinolizine BQ 11c
527 SEC SEC Secnidazole CLSI X 530 Nitroimidazoles IMIDAZ
528 ISV ISV Isavuconazole EUCAST X 531 Antifungals FUNG
529 MUP MU2 MUP MUP Mupirocin EUCAST X 532 200ug Pseudomonic acids PSEUDOM 27 X Mupirocin 20389-3 35822-6 35823-4 7033-4
530 MEV MEV Meropenem/Vaborbactam CLSI X 533 20/10ug Beta-lactam+Inhibitors 03c X 14 15-17 18 4 16
531 ZWK ZWK Nafithromycin CLSI X 534 15ug Macrolides Ketolide MACRO 17 X
532 PEX PEX Pexiganan CLSI X 535 Peptsides Magainin PEPTIDE X
533 Retapamulin CLSI X 538 Pleuromutilins
534 Rifapentine CLSI X 539 Ansamycins
535 FDC FDC Cefiderocol CLSI X 537 Cephems Siderophore 4 16
536 FPZ FPZ Cefepime/Zidebactam CLSI X 536
537 ZID ZID Zidebactam CLSI 540 X
538 RID RID Ridinilazole CLSI 541 X
539 TBP TBP Tebipenem CLSI X 10ug Penems Carbapenems X
540 MNC MNC Meropenem/Nacubactam CLSI X Beta-lactam+Inhibitors
541 NAC NAC Nacubactam CLSI X Beta-lactamase inhibitors
542 TYL TYL Tylosin EUCAST 304 30ug Macrolides 16-Membered ring 17
543 ITR ITR Itraconazole NEO X 133 10ug Antifungals FUNG 29 X
544 CZA CZA Ceftazidime/Avibactam EUCAST 498 10/4ug Beta-lactam+Inhibitors 03 X 20 21 8 16
545 BPR BPR Ceftobiprole EUCAST 474 5ug Cephems Cephalosporin 04e X
546 AMX AMX Amoxicillin SFM 82 20ug Penicillins Aminopenicillin 01b X

22
data-raw/read_EUCAST.R
View File

@ -26,7 +26,7 @@ library(AMR)
# USE THIS FUNCTION TO READ THE EUCAST EXCEL FILE THAT CONTAINS THE BREAKPOINT TABLES # USE THIS FUNCTION TO READ THE EUCAST EXCEL FILE THAT CONTAINS THE BREAKPOINT TABLES
read_EUCAST <- function(sheet, file = "data-raw/v_10.0_Breakpoint_Tables.xlsx") { read_EUCAST <- function(sheet, file, guideline_name) {
message("Getting sheet ", sheet) message("Getting sheet ", sheet)
sheet.bak <- sheet sheet.bak <- sheet
@ -172,7 +172,7 @@ read_EUCAST <- function(sheet, file = "data-raw/v_10.0_Breakpoint_Tables.xlsx")
mutate(method = ifelse(type %like% "MIC", "MIC", "DISK"), mutate(method = ifelse(type %like% "MIC", "MIC", "DISK"),
type = gsub("^.*_", "breakpoint_", type)) %>% type = gsub("^.*_", "breakpoint_", type)) %>%
pivot_wider(names_from = type, values_from = value) %>% pivot_wider(names_from = type, values_from = value) %>%
mutate(guideline = "EUCAST 2020", mutate(guideline = guideline_name,
disk_dose = ifelse(method == "DISK", disk_dose, NA_character_), disk_dose = ifelse(method == "DISK", disk_dose, NA_character_),
mo = ifelse(mo == "", mo_sheet, mo)) %>% mo = ifelse(mo == "", mo_sheet, mo)) %>%
filter(!(is.na(breakpoint_S) & is.na(breakpoint_R))) %>% filter(!(is.na(breakpoint_S) & is.na(breakpoint_R))) %>%
@ -219,8 +219,18 @@ sheets_to_analyse <- c("Enterobacterales",
"M.tuberculosis", "M.tuberculosis",
"PK PD breakpoints") "PK PD breakpoints")
new_EUCAST <- read_EUCAST(sheets_to_analyse[1]) # takes the longest time file <- "data-raw/v_10.0_Breakpoint_Tables.xlsx"
for (i in 2:length(sheets_to_analyse)) { guideline_name <- "EUCAST 2020"
new_EUCAST <<- new_EUCAST %>% bind_rows(read_EUCAST(sheets_to_analyse[i]))
}
# takes the longest time:
new_EUCAST <- read_EUCAST(sheet = sheets_to_analyse[1],
file = file,
guideline_name = guideline_name)
for (i in 2:length(sheets_to_analyse)) {
tryCatch(
new_EUCAST <<- bind_rows(new_EUCAST,
read_EUCAST(sheet = sheets_to_analyse[i],
file = file,
guideline_name = guideline_name))
, error = function(e) message(e$message))
}

29
data-raw/reproduction_of_rsi_translation.R
View File

@ -42,9 +42,38 @@ rsi_translation <- bind_rows(tbl_mic, tbl_disk) %>%
mutate(disk_dose = gsub("µ", "u", disk_dose)) %>% mutate(disk_dose = gsub("µ", "u", disk_dose)) %>%
select(-ends_with("_mic"), -ends_with("_disk")) select(-ends_with("_mic"), -ends_with("_disk"))
# add extra CLSI general guidelines
clsi_general <- read_tsv("data-raw/DRGLST.txt") %>%
filter(CLSI == "X") %>%
select(WHON5_CODE,
disk_dose = POTENCY,
starts_with("CLSI"),
-c(CLSI, CLSI_ORDER)) %>%
mutate_at(vars(matches("CLSI")), as.double) %>%
pivot_longer(-c(WHON5_CODE, disk_dose)) %>%
mutate(method = ifelse(name %like% "_D", "DISK", "MIC"),
breakpoint = paste0("breakpoint_", gsub(".*([A-Z])$", "\\1", name)),
guideline = paste0("CLSI 20", cleaner::clean_integer(name))) %>%
filter(breakpoint != "breakpoint_I", !is.na(value)) %>%
select(-name) %>%
pivot_wider(names_from = breakpoint, values_from = value) %>%
transmute(guideline,
method,
site = NA_character_,
mo = as.mo("UNKNOWN"),
ab = as.ab(WHON5_CODE),
ref_tbl = "Generic CLSI rules",
disk_dose = gsub("/", "-", disk_dose, fixed = TRUE),
breakpoint_S,
breakpoint_R)
# add new EUCAST with read_EUCAST.R # add new EUCAST with read_EUCAST.R
# 2020-04-14 did that now for 2019 and 2020
rsi_translation <- rsi_translation %>% rsi_translation <- rsi_translation %>%
# filter(guideline != "EUCAST 2019") %>%
bind_rows(new_EUCAST) %>% bind_rows(new_EUCAST) %>%
bind_rows(clsi_general) %>%
mutate(uti = site %like% "(UTI|urinary)") %>% mutate(uti = site %like% "(UTI|urinary)") %>%
as.data.frame(stringsAsFactors = FALSE) %>% as.data.frame(stringsAsFactors = FALSE) %>%
# force classes again # force classes again

4081
data-raw/rsi_translation.txt
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data/rsi_translation.rda
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2
docs/404.html
View File

@ -81,7 +81,7 @@
</button> </button>
<span class="navbar-brand"> <span class="navbar-brand">
<a class="navbar-link" href="https://msberends.gitlab.io/AMR/index.html">AMR (for R)</a> <a class="navbar-link" href="https://msberends.gitlab.io/AMR/index.html">AMR (for R)</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.0.1.9005</span> <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.0.1.9006</span>
</span> </span>
</div> </div>

2
docs/LICENSE-text.html
View File

@ -81,7 +81,7 @@
</button> </button>
<span class="navbar-brand"> <span class="navbar-brand">
<a class="navbar-link" href="index.html">AMR (for R)</a> <a class="navbar-link" href="index.html">AMR (for R)</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.0.1.9005</span> <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.0.1.9006</span>
</span> </span>
</div> </div>

2
docs/articles/index.html
View File

@ -81,7 +81,7 @@
</button> </button>
<span class="navbar-brand"> <span class="navbar-brand">
<a class="navbar-link" href="../index.html">AMR (for R)</a> <a class="navbar-link" href="../index.html">AMR (for R)</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.0.1.9005</span> <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.0.1.9006</span>
</span> </span>
</div> </div>

2
docs/authors.html
View File

@ -81,7 +81,7 @@
</button> </button>
<span class="navbar-brand"> <span class="navbar-brand">
<a class="navbar-link" href="index.html">AMR (for R)</a> <a class="navbar-link" href="index.html">AMR (for R)</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.0.1.9005</span> <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.0.1.9006</span>
</span> </span>
</div> </div>

2
docs/index.html
View File

@ -43,7 +43,7 @@
</button> </button>
<span class="navbar-brand"> <span class="navbar-brand">
<a class="navbar-link" href="index.html">AMR (for R)</a> <a class="navbar-link" href="index.html">AMR (for R)</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.0.1.9005</span> <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.0.1.9006</span>
</span> </span>
</div> </div>

14
docs/news/index.html
View File

@ -81,7 +81,7 @@
</button> </button>
<span class="navbar-brand"> <span class="navbar-brand">
<a class="navbar-link" href="../index.html">AMR (for R)</a> <a class="navbar-link" href="../index.html">AMR (for R)</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.0.1.9005</span> <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.0.1.9006</span>
</span> </span>
</div> </div>
@ -229,13 +229,13 @@
<small>Source: <a href='https://gitlab.com/msberends/AMR/blob/master/NEWS.md'><code>NEWS.md</code></a></small> <small>Source: <a href='https://gitlab.com/msberends/AMR/blob/master/NEWS.md'><code>NEWS.md</code></a></small>
</div> </div>
<div id="amr-1019005" class="section level1"> <div id="amr-1019006" class="section level1">
<h1 class="page-header" data-toc-text="1.0.1.9005"> <h1 class="page-header" data-toc-text="1.0.1.9006">
<a href="#amr-1019005" class="anchor"></a>AMR 1.0.1.9005<small> Unreleased </small> <a href="#amr-1019006" class="anchor"></a>AMR 1.0.1.9006<small> Unreleased </small>
</h1> </h1>
<div id="last-updated-13-apr-2020" class="section level2"> <div id="last-updated-14-apr-2020" class="section level2">
<h2 class="hasAnchor"> <h2 class="hasAnchor">
<a href="#last-updated-13-apr-2020" class="anchor"></a><small>Last updated: 13-Apr-2020</small> <a href="#last-updated-14-apr-2020" class="anchor"></a><small>Last updated: 14-Apr-2020</small>
</h2> </h2>
<div id="new" class="section level3"> <div id="new" class="section level3">
<h3 class="hasAnchor"> <h3 class="hasAnchor">
@ -260,6 +260,8 @@
</ul> </ul>
</li> </li>
<li>Added more abbreviations to the <code>antibiotics</code> data set</li> <li>Added more abbreviations to the <code>antibiotics</code> data set</li>
<li>Reloaded original EUCAST master tables from 2019 (2020 was already available). This seems more reliable than the data we used from WHONET.</li>
<li>Added generic CLSI rules for R/SI interpretation using <code><a href="../reference/as.rsi.html">as.rsi()</a></code> for years 2010-2019 (thanks to Anthony Underwood)</li>
</ul> </ul>
</div> </div>
<div id="other" class="section level3"> <div id="other" class="section level3">

2
docs/pkgdown.yml
View File

@ -10,7 +10,7 @@ articles:
WHONET: WHONET.html WHONET: WHONET.html
benchmarks: benchmarks.html benchmarks: benchmarks.html
resistance_predict: resistance_predict.html resistance_predict: resistance_predict.html
last_built: 2020-04-13T19:09Z last_built: 2020-04-14T12:12Z
urls: urls:
reference: https://msberends.gitlab.io/AMR/reference reference: https://msberends.gitlab.io/AMR/reference
article: https://msberends.gitlab.io/AMR/articles article: https://msberends.gitlab.io/AMR/articles

2
docs/reference/index.html
View File

@ -81,7 +81,7 @@
</button> </button>
<span class="navbar-brand"> <span class="navbar-brand">
<a class="navbar-link" href="../index.html">AMR (for R)</a> <a class="navbar-link" href="../index.html">AMR (for R)</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.0.1.9005</span> <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.0.1.9006</span>
</span> </span>
</div> </div>

48
docs/reference/like.html
View File

@ -24,16 +24,20 @@
<script src="https://cdnjs.cloudflare.com/ajax/libs/twitter-bootstrap/3.4.1/js/bootstrap.min.js" integrity="sha256-nuL8/2cJ5NDSSwnKD8VqreErSWHtnEP9E7AySL+1ev4=" crossorigin="anonymous"></script> <script src="https://cdnjs.cloudflare.com/ajax/libs/twitter-bootstrap/3.4.1/js/bootstrap.min.js" integrity="sha256-nuL8/2cJ5NDSSwnKD8VqreErSWHtnEP9E7AySL+1ev4=" crossorigin="anonymous"></script>
<!-- bootstrap-toc -->
<link rel="stylesheet" href="../bootstrap-toc.css">
<script src="../bootstrap-toc.js"></script>
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<link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.11.1/css/all.min.css" integrity="sha256-PbSmjxuVAzJ6FPvNYsrXygfGhNJYyZ2GktDbkMBqQZg=" crossorigin="anonymous" /> <link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.12.1/css/all.min.css" integrity="sha256-mmgLkCYLUQbXn0B1SRqzHar6dCnv9oZFPEC1g1cwlkk=" crossorigin="anonymous" />
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<meta property="og:title" content="Pattern Matching — like" /> <meta property="og:title" content="Pattern Matching — like" />
<meta property="og:description" content="Convenient wrapper around base::grep() to match a pattern: a %like% b. It always returns a logical vector and is always case-insensitive (use a %like_case% b for case-sensitive matching). Also, pattern (b) can be as long as x (a) to compare items of each index in both vectors, or they both can have the same length to iterate over all cases." /> <meta property="og:description" content="Convenient wrapper around grep() to match a pattern: x %like% pattern. It always returns a logical vector and is always case-insensitive (use x %like_case% pattern for case-sensitive matching). Also, pattern can be as long as x to compare items of each index in both vectors, or they both can have the same length to iterate over all cases." />
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<a class="navbar-link" href="../index.html">AMR (for R)</a> <a class="navbar-link" href="../index.html">AMR (for R)</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.0.1.9004</span> <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.0.1.9006</span>
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<h1>Pattern Matching</h1> <h1>Pattern Matching</h1>
<small class="dont-index">Source: <a href='https://gitlab.com/msberends/AMR/blob/master/R/like.R'><code>R/like.R</code></a></small>
<div class="hidden name"><code>like.Rd</code></div> <div class="hidden name"><code>like.Rd</code></div>
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<div class="ref-description"> <div class="ref-description">
<p>Convenient wrapper around <code><a href='https://rdrr.io/r/base/grep.html'>base::grep()</a></code> to match a pattern: <code>a %like% b</code>. It always returns a <code><a href='https://rdrr.io/r/base/logical.html'>logical</a></code> vector and is always case-insensitive (use <code>a %like_case% b</code> for case-sensitive matching). Also, <code>pattern</code> (<em>b</em>) can be as long as <code>x</code> (<em>a</em>) to compare items of each index in both vectors, or they both can have the same length to iterate over all cases.</p> <p>Convenient wrapper around <code><a href='https://rdrr.io/r/base/grep.html'>grep()</a></code> to match a pattern: <code>x %like% pattern</code>. It always returns a <code><a href='https://rdrr.io/r/base/logical.html'>logical</a></code> vector and is always case-insensitive (use <code>x %like_case% pattern</code> for case-sensitive matching). Also, <code>pattern</code> can be as long as <code>x</code> to compare items of each index in both vectors, or they both can have the same length to iterate over all cases.</p>
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<pre class="usage"><span class='fu'>like</span>(<span class='no'>x</span>, <span class='no'>pattern</span>, <span class='kw'>ignore.case</span> <span class='kw'>=</span> <span class='fl'>TRUE</span>) <pre class="usage"><span class='fu'>like</span>(<span class='no'>x</span>, <span class='no'>pattern</span>, <span class='kw'>ignore.case</span> <span class='kw'>=</span> <span class='fl'>TRUE</span>)
@ -262,7 +266,8 @@
<p>A <code><a href='https://rdrr.io/r/base/logical.html'>logical</a></code> vector</p> <p>A <code><a href='https://rdrr.io/r/base/logical.html'>logical</a></code> vector</p>
<h2 class="hasAnchor" id="details"><a class="anchor" href="#details"></a>Details</h2> <h2 class="hasAnchor" id="details"><a class="anchor" href="#details"></a>Details</h2>
<p>Using RStudio? This function can also be inserted from the Addins menu and can have its own Keyboard Shortcut like <code>Ctrl+Shift+L</code> or <code>Cmd+Shift+L</code> (see <code>Tools</code> &gt; <code>Modify Keyboard Shortcuts...</code>).</p> <p>When running a regular expression fails, these functions try again with <code><a href='https://rdrr.io/r/base/grep.html'>base::grepl(..., perl = TRUE)</a></code>.</p>
<p>Using RStudio? This function can also be inserted from the Addins menu and can have its own Keyboard Shortcut like <code>Ctrl+Shift+L</code> or <code>Cmd+Shift+L</code> (see <code>Tools</code> &gt; <code>Modify Keyboard Shortcuts...</code>).</p>
<h2 class="hasAnchor" id="stable-lifecycle"><a class="anchor" href="#stable-lifecycle"></a>Stable lifecycle</h2> <h2 class="hasAnchor" id="stable-lifecycle"><a class="anchor" href="#stable-lifecycle"></a>Stable lifecycle</h2>
@ -297,22 +302,13 @@ The <a href='lifecycle.html'>lifecycle</a> of this function is <strong>stable</s
<span class='co'># get frequencies of bacteria whose name start with 'Ent' or 'ent'</span> <span class='co'># get frequencies of bacteria whose name start with 'Ent' or 'ent'</span>
<span class='fu'><a href='https://rdrr.io/r/base/library.html'>library</a></span>(<span class='no'>dplyr</span>) <span class='fu'><a href='https://rdrr.io/r/base/library.html'>library</a></span>(<span class='no'>dplyr</span>)
<span class='no'>example_isolates</span> <span class='kw'>%&gt;%</span> <span class='no'>example_isolates</span> <span class='kw'>%&gt;%</span>
<span class='fu'><a href='https://dplyr.tidyverse.org/reference/filter.html'>filter</a></span>(<span class='fu'><a href='mo_property.html'>mo_name</a></span>(<span class='no'>mo</span>) <span class='kw'>%like%</span> <span class='st'>'^ent'</span>) <span class='kw'>%&gt;%</span> <span class='fu'><a href='https://dplyr.tidyverse.org/reference/filter.html'>filter</a></span>(<span class='fu'><a href='mo_property.html'>mo_name</a></span>(<span class='no'>mo</span>) <span class='kw'>%like%</span> <span class='st'>"^ent"</span>) <span class='kw'>%&gt;%</span>
<span class='fu'><a href='https://rdrr.io/pkg/cleaner/man/freq.html'>freq</a></span>(<span class='fu'><a href='mo_property.html'>mo_genus</a></span>(<span class='no'>mo</span>))</pre> <span class='fu'><a href='https://rdrr.io/pkg/cleaner/man/freq.html'>freq</a></span>(<span class='fu'><a href='mo_property.html'>mo_genus</a></span>(<span class='no'>mo</span>))</pre>
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<h2>Contents</h2> <nav id="toc" data-toggle="toc" class="sticky-top">
<ul class="nav nav-pills nav-stacked"> <h2 data-toc-skip>Contents</h2>
<li><a href="#arguments">Arguments</a></li> </nav>
<li><a href="#source">Source</a></li>
<li><a href="#value">Value</a></li>
<li><a href="#details">Details</a></li>
<li><a href="#stable-lifecycle">Stable lifecycle</a></li>
<li><a href="#read-more-on-our-website-">Read more on our website!</a></li>
<li><a href="#see-also">See also</a></li>
<li><a href="#examples">Examples</a></li>
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@ -323,7 +319,7 @@ The <a href='lifecycle.html'>lifecycle</a> of this function is <strong>stable</s
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@ -82,7 +82,7 @@
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<a class="navbar-link" href="../index.html">AMR (for R)</a> <a class="navbar-link" href="../index.html">AMR (for R)</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.0.1.9005</span> <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.0.1.9006</span>
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@ -240,7 +240,7 @@
<h2 class="hasAnchor" id="format"><a class="anchor" href="#format"></a>Format</h2> <h2 class="hasAnchor" id="format"><a class="anchor" href="#format"></a>Format</h2>
<p>A <code><a href='https://rdrr.io/r/base/data.frame.html'>data.frame</a></code> with 15,745 observations and 10 variables:</p><ul> <p>A <code><a href='https://rdrr.io/r/base/data.frame.html'>data.frame</a></code> with 18,964 observations and 10 variables:</p><ul>
<li><p><code>guideline</code><br /> Name of the guideline</p></li> <li><p><code>guideline</code><br /> Name of the guideline</p></li>
<li><p><code>method</code><br /> Either "MIC" or "DISK"</p></li> <li><p><code>method</code><br /> Either "MIC" or "DISK"</p></li>
<li><p><code>site</code><br /> Body site, e.g. "Oral" or "Respiratory"</p></li> <li><p><code>site</code><br /> Body site, e.g. "Oral" or "Respiratory"</p></li>

6
man/like.Rd
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@ -26,9 +26,11 @@ x \%like_case\% pattern
A \code{\link{logical}} vector A \code{\link{logical}} vector
} }
\description{ \description{
Convenient wrapper around \code{\link[base:grep]{base::grep()}} to match a pattern: \code{a \%like\% b}. It always returns a \code{\link{logical}} vector and is always case-insensitive (use \code{a \%like_case\% b} for case-sensitive matching). Also, \code{pattern} (\emph{b}) can be as long as \code{x} (\emph{a}) to compare items of each index in both vectors, or they both can have the same length to iterate over all cases. Convenient wrapper around \code{\link[=grep]{grep()}} to match a pattern: \code{x \%like\% pattern}. It always returns a \code{\link{logical}} vector and is always case-insensitive (use \code{x \%like_case\% pattern} for case-sensitive matching). Also, \code{pattern} can be as long as \code{x} to compare items of each index in both vectors, or they both can have the same length to iterate over all cases.
} }
\details{ \details{
When running a regular expression fails, these functions try again with \code{base::grepl(..., perl = TRUE)}.
Using RStudio? This function can also be inserted from the Addins menu and can have its own Keyboard Shortcut like \code{Ctrl+Shift+L} or \code{Cmd+Shift+L} (see \code{Tools} > \verb{Modify Keyboard Shortcuts...}). Using RStudio? This function can also be inserted from the Addins menu and can have its own Keyboard Shortcut like \code{Ctrl+Shift+L} or \code{Cmd+Shift+L} (see \code{Tools} > \verb{Modify Keyboard Shortcuts...}).
} }
\section{Stable lifecycle}{ \section{Stable lifecycle}{
@ -62,7 +64,7 @@ a \%like\% b
# get frequencies of bacteria whose name start with 'Ent' or 'ent' # get frequencies of bacteria whose name start with 'Ent' or 'ent'
library(dplyr) library(dplyr)
example_isolates \%>\% example_isolates \%>\%
filter(mo_name(mo) \%like\% '^ent') \%>\% filter(mo_name(mo) \%like\% "^ent") \%>\%
freq(mo_genus(mo)) freq(mo_genus(mo))
} }
\seealso{ \seealso{

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@ -5,7 +5,7 @@
\alias{rsi_translation} \alias{rsi_translation}
\title{Data set for R/SI interpretation} \title{Data set for R/SI interpretation}
\format{ \format{
A \code{\link{data.frame}} with 15,745 observations and 10 variables: A \code{\link{data.frame}} with 18,964 observations and 10 variables:
\itemize{ \itemize{
\item \code{guideline}\cr Name of the guideline \item \code{guideline}\cr Name of the guideline
\item \code{method}\cr Either "MIC" or "DISK" \item \code{method}\cr Either "MIC" or "DISK"